Hymenobacter sp. PAMC 26628: AXW84_06295
Help
Entry
AXW84_06295 CDS
T04961
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
hyz
Hymenobacter sp. PAMC 26628
Pathway
hyz00300
Lysine biosynthesis
hyz00550
Peptidoglycan biosynthesis
hyz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hyz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AXW84_06295
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AXW84_06295
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hyz01011
]
AXW84_06295
Enzymes [BR:
hyz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AXW84_06295
Peptidoglycan biosynthesis and degradation proteins [BR:
hyz01011
]
Precursor biosynthesis
Amino acid ligase
AXW84_06295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AMJ65080
UniProt:
A0A126P7I5
LinkDB
All DBs
Position
1367824..1369296
Genome browser
AA seq
490 aa
AA seq
DB search
MISLPLFSLLADVAVLQQQGPPDGAITGLTLDSREAGPGVAFCALRGTATDGHKFIETAV
AQGAAAVICEELPAVLRPGTTYVQVADSAGALGLVAAAFHGHPSRRLKLIGVTGTNGKTT
CATLLHKLLRELGYHAGLLSTVQNQIDETVIPATHTTPDAIRLNALLARMVAAGCTHACM
EVSSHAVVQHRVTGLRFAGGIFTNLTHDHLDYHGTFDNYLKAKKGFFDALPKTAFALTNA
DDKRGPVMLQNTAARRETYSLRGAATFRARLIANEVHGLFLEIDGREVQFRLIGVFNAYN
LLAVYGAAVLLGEDPTEVLTILSGLNTAPGRFEPVVSARQRITAVVDYAHTPDALENVLQ
TLHQIRRPEQRIITVVGCGGNRDAAKRPVMAALAARLSDQVVFTSDNPRFEDPLEILAQM
QAGVLAPDAARVRTLPDRRAAIEAALAWAGPHDIVLVAGKGHENYQDVQGVKTHFDDKEV
LLELFETLNK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
ttgatttctctcccactcttttccttgctcgccgacgtggccgtgctccagcagcagggg
ccccccgacggggccatcaccggcctcaccctcgactcgcgggaggcgggccccggggtg
gcgttttgcgccctgcgcggcacggctactgacggccacaagttcatcgaaaccgccgtg
gcccagggcgcggcggccgtcatttgcgaggagctgccggccgtgctgcgccccggcacc
acctacgtgcaggtagccgacagcgccggggccctgggcctggtggcggcagcgtttcat
ggccacccatcgcgccggctcaagctgattggcgtgacgggcaccaacggcaaaactacc
tgcgccacgctgctgcacaagctgctgcgcgaactgggctaccacgccggcctgctgagc
acggtgcagaaccagatcgacgaaactgttattcccgccacccacaccacgcccgacgcc
attcggctgaacgcgctgctggcccgcatggtggccgccggctgcacccacgcttgtatg
gaggtgagcagccacgccgtggtccagcaccgcgtgacgggcctgcgcttcgcgggcggc
atttttaccaacctcacccacgaccacctcgactaccacggcacgttcgacaactacctg
aaagccaagaagggcttcttcgacgcgctgcccaaaaccgcctttgccctcaccaacgcc
gacgacaagcggggccccgtgatgctgcaaaacaccgccgcccgccgcgaaacctactcg
ctgcgcggggcggccacgttccgggcccgcctcattgccaacgaagtgcacggcctgttc
ctggaaattgacggccgcgaggtgcaattccgcctcatcggcgtattcaacgcctacaac
ttgctggccgtgtacggggccgccgtgctgctgggcgaagacccgacggaggtgctcacc
attctttcgggcctgaacacggcccctggccgcttcgagccggtggtgtcggcgcgccag
cgtatcacggccgtggtagactacgcccacacgcccgacgcgctggaaaatgtgctccaa
accctgcaccaaatccgccggcccgagcagcgcatcattacggtagtgggctgcggcggc
aaccgcgacgccgccaagcgccccgtaatggccgccctcgccgcccgcctgtccgaccaa
gtggtgttcacctccgacaacccgcgcttcgaggacccgctcgaaatactggcccagatg
caagccggcgtgctggcgcccgacgcggcccgcgtgcgcaccctgcccgaccgccgcgcc
gccatcgaggctgccctggcgtgggcggggccccacgacattgtgctggtggccggcaag
ggccacgaaaactaccaggacgtgcagggcgtgaaaacccacttcgacgacaaggaagtc
ctgctcgaattatttgaaactttgaacaagtaa
DBGET
integrated database retrieval system
