Hymenobacter sp. PAMC 26628: AXW84_16595
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Entry
AXW84_16595 CDS
T04961
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
hyz
Hymenobacter sp. PAMC 26628
Pathway
hyz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hyz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AXW84_16595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hyz03021
]
AXW84_16595
03019 Messenger RNA biogenesis [BR:
hyz03019
]
AXW84_16595
Transcription machinery [BR:
hyz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AXW84_16595
Messenger RNA biogenesis [BR:
hyz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AXW84_16595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
AAA_25
ATPase_2
NACHT
AAA
Spore_III_AA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AMJ66867
UniProt:
A0A126PCM2
LinkDB
All DBs
Position
complement(3811443..3813752)
Genome browser
AA seq
769 aa
AA seq
DB search
MHTLNELKDRLLPDLKELAEQLNVGNFKRLSKQDLIYKILDQQAAQPGPEAAAEAATAAA
PAAKPARAPRAAAAATGAPAVARTSRRVAPLVPEQPFSDVAPPAAEGPSAVQIAPILVET
VAVAPAAVAAQEEAPAAEAAPVSAQPTAETPAEGAEAAPAADGAPAERHRRERVGRNGRP
ISENRAAEQAAQAARDEARAAREAVESSEGNVALPAPSAEASATDAAGRPNGSPRDNPRR
DYGADDYANRRNDRDQPRAFRQDQPRNGQDQQPREYRNDQPREYRNGNGQDQPRQDQPRS
DQARQDQLRNGQGQDQPRNGQDQQPRMTREERQAQRDQQRQQRRDEQRANGQNPDQPQGQ
PNQGQNPNQGQNPNQNQGQGQNQGQNQNQNQRPARQEIDLVVPGNGTFELMPDGGYGFLR
SPFYNYLTSPDDIYVSPQQVKQFALKPGDTVAGTIRPPREGEKYFALVGIDSMNGRTVEE
VRDRVPFSHLTPLFADERMQLSTKPSQISTRVLDMFAPIGKGQRGLIVAQPKTGKTVLLQ
EIANAISENHPEVYLMILLIDERPEEVTDMARTVKAEVLSSTFDETADRHVKIAEMALDK
ARRLVECGHDVVILLDSITRLARAYNTVQPSSSRILSGGIDAGALQKPKRFFGAARNVEG
GGSLTIIATALIETGSKMDEVIFEEFKGTGNMELQLDRKLANKRVFPAIDIPASGTRRED
LLMTKEELGRVWVLRRFMTDMSATEAMEFLKDRIKGTKDNHEFLLSMNG
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccctcaacgagttgaaggaccgtttgctgcccgacctcaaagaacttgccgag
cagctcaacgttggcaatttcaagcggctcagtaagcaggatttgatttacaagattctg
gaccagcaggccgcccaaccgggccccgaagccgccgctgaggccgccacggccgctgcg
cccgccgccaaaccggcccgcgctccccgcgccgctgctgccgccaccggggcccctgcc
gtggcccgcaccagccgccgcgtcgcgcccctggtgcccgagcagcccttctccgacgtg
gccccgcccgccgcggagggcccctccgccgtgcagatagctccaattctggtcgaaacg
gttgctgttgcccccgcagccgtggctgcccaggaggaagcaccggctgctgaagctgct
cctgtttcagcccagcccacggctgaaactcctgcggaaggtgccgaagctgctccggcg
gctgatggggcccctgccgagcgccaccgccgcgagcgggtgggccgcaacggccggccc
atcagcgagaaccgcgccgccgagcaagccgcccaagccgcccgcgacgaggcccgcgcc
gcccgcgaagccgtggaaagcagcgagggcaatgtggccctgcccgcgcccagcgccgag
gcttcggccaccgacgccgccggccgccccaacgggtccccccgcgacaatccccggcgc
gattacggcgccgatgactatgccaaccgccgcaacgaccgtgaccagccccgcgctttc
cggcaagaccagccccgcaatggccaggaccagcagccccgcgagtaccgcaacgaccag
ccccgcgagtaccgcaacggcaacggccaggaccaaccccgccaggatcagccgcgcagc
gaccaagcgcggcaagaccagctccgcaacggccaaggccaggaccagccgcgcaacggc
caggaccagcagccccgcatgacccgcgaggagcgccaggcccagcgcgaccagcaacgc
cagcagcgccgcgacgagcagcgcgccaacggccaaaaccccgaccagccccagggccag
ccgaaccaaggccagaacccaaaccaaggccagaacccgaatcaaaaccagggccagggc
caaaatcaggggcaaaaccagaatcaaaaccagcgccccgcccgccaggaaatcgacttg
gtggtgcccggcaacggcacgtttgagctgatgcccgacggcggctacggcttcctgcgc
tcgccgttttacaactacctgacctcgccggacgacatttacgtgtcgccgcagcaggtg
aagcaatttgccctgaagcccggcgatacggtggcgggcaccatccggccgccgcgcgaa
ggcgagaagtattttgccctggtgggcatcgacagcatgaacgggcgcaccgtggaggaa
gtccgcgaccgggtgccgttcagccacttaacgccgctgtttgccgacgagcggatgcag
ctcagcaccaagcccagccaaatcagcacccgcgtgcttgacatgtttgccccgattggc
aagggccagcggggcctcatcgtggcccagcccaaaaccggcaaaacggtactgctccag
gaaattgccaacgccatttcggaaaaccaccccgaggtgtatttgatgattttgctcatc
gacgagcggccggaggaagtgaccgacatggcccgcactgtgaaggccgaagtactcagc
tcgaccttcgacgaaacggccgaccgccacgtgaaaattgccgaaatggccctcgacaag
gcccggcgcctcgtggagtgcggccacgacgtggtgattctgctcgactccatcacccgc
ctggcgcgggcctacaacacggtgcagcccagcagttcgcgcatcctctcgggcggcatc
gacgccggggccctgcaaaagcccaagcgcttcttcggcgcggcccgcaacgtggagggc
ggcggctcgctcaccatcatcgccacggcgctgattgagacgggctcgaaaatggacgaa
gtaatctttgaagaattcaagggcaccggcaacatggaactgcaactggaccgcaagctg
gccaacaagcgcgtgttcccggccatcgacatcccggcttccggtacccgccgcgaagac
ctgctgatgaccaaggaagagctgggccgtgtgtgggtgctgcgccgcttcatgaccgac
atgagcgccaccgaagccatggaattcctgaaagaccgcatcaaaggcaccaaggacaac
cacgagttcctgctttcgatgaacggctaa
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