Helicoverpa zea (corn earworm): 124634921
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Entry
124634921 CDS
T08400
Name
(RefSeq) probable helicase senataxin
KO
K10706
senataxin [EC:5.6.2.-]
Organism
hze
Helicoverpa zea (corn earworm)
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hze03021
]
124634921
Transcription machinery [BR:
hze03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124634921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
FHA
AAA_30
AAA_19
Viral_helicase1
Yop-YscD_cpl
UvrD_C_2
STL11_N
nSTAND1
AAA_16
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
124634921
NCBI-ProteinID:
XP_047026562
LinkDB
All DBs
Position
12:complement(7707132..7725827)
Genome browser
AA seq
1407 aa
AA seq
DB search
MAKWKLTRQNFGTEEFTVSEGDNVTVGRGINNIITLSSAVISRNHCVIQVQNNRGIITDL
KSSNGVYVGTTKIPPNTPYVIQDSDIIGLGWTVGAPLVNINDSEKYVFKFIKETCSLPIT
NKLKFQSENELDEIESKIAKLDGNENNIQTAQSKNNKSPVLNAKAPLKRKIDQINVKEEP
KSGDDNIVHIVLSDSDSETRAKPLETGAKKTKLEPISEEQLKPLLKDIDIKHENEMEFDA
FNVKQEYLGYEEPISIDSDSDSESEQWLMRLSQSSPGKPFMKMAKSPKVENTQEDSSYSQ
LDDFVCMSNLDFEENDDKDDDDFVDDLISLNLRPPDDEIHKVPDITKGRQAEDNESEELF
EDIVSNKQPVKDKDEIDGYSMEEVLKEADMLLKSPTRDSVKKAQLIEPIAHGTKHKSNQI
KIIEIKPKSSSSSRHHKDKSSSKRHISNSQKEERKRKLKEIACKEKETESIENRDSSTNN
KPISTNVKITTTNRGAFLTDVAQAIVNPIKRKEHVPKGKQKDGETSPQSKEVKGKEGDVN
EDLENKRKAPEKTIKDKGESSKHKNHSKAENIQDKVTPKPMETEKRLPLKIIKPLTDGEY
FSGKPVSKVGPLKNEQQKKVVRFSEVPPQVLVFEIEPGNRMKKTSLVKTMVDVRQAPVFS
LEKLTLMKILRWNPQWFEEQLNNTEPPPILGHNNPPMSVFHSFVNHNQYVQLIGDLLLME
IWEYLTLAYMKIRNQNNGIELRIESLPPIPSHERCLELFSLSVNVSVPERGSKMLPRVGE
VLLVSFGPEHAKNQRFFYVHNVRCLPSPPSNRHAFYSISLHATYTDKMRTLKPGELMIGR
NLAYINKELQLFEAMEYLAGSPLSDAILRPEPHHFVMSQQVQSFDMQSQWTRTLNPSQLT
AVSSSVAAALGDKPSIQMVQGPPGTGKSSVICAIVMTYFYNAQVKKQQNRGKILICATSN
AAVDGLVIRLLNLRQSLPKSERFRMVRVGREEAMHPEAANISSQQLAKRDLGRINSDQPP
APAGLNEEILHIEAKINMWKTQAQDAKDQSRVAYCQGRVDDLMKRMALLRTGPGRAGGAD
ALRPEQLAHTERRIIEGADIVVTTLASAQNYKMKGLKRRIALCIIDEAGQVMEPETLVPL
TLDVTRLTLIGDPQQLPGFICSQRAKRHGLNESLFSRLSSCTEQWPSGSPVVLLNQQYRM
QPDIADYPSRAFYDGRIISVPPTRPDIDIPAYNIISISSGDKGQGLSGANELEAWGVSRL
VAALLPRLRPRRLRLAVITPYNAHKDLIKRHLRTLQLGDNQVEVNTVDSFQGQERDVVVV
SLARSQGVGFLTDAGRMNVMLTRAKHALLVCLNPHALIKNHQWRTLVEDAQRRNLYRELP
NKMCQPITAAQLPSDNILSYITHKTHR
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatggaaattaactcgacaaaattttggaactgaagagttcacggtctcggaa
ggcgataatgtaaccgtaggcaggggaataaataatattataactctttcaagcgcagtt
atatccaggaatcactgcgttatacaagttcaaaataatcgcggaatcattacagactta
aagagttcaaatggagtatatgttggaaccactaagataccgccgaatactccatatgtc
atacaagattcagatatcattggtttgggctggaccgttggagctccccttgttaacata
aatgacagtgagaaatatgtcttcaaatttatcaaagaaacttgttcattacctattaca
aataaattgaaatttcaaagtgagaatgaacttgatgaaattgaatctaaaattgcaaaa
ttagatggaaatgagaacaatattcagactgctcagtctaaaaacaataaatctccggtt
ctaaatgctaaagcaccactaaagagaaagatagatcaaataaacgtgaaagaagagccc
aaaagtggtgatgataatatcgtgcatattgttttatctgacagtgatagtgaaactcgt
gccaaaccacttgaaactggggctaagaaaacaaaacttgaacctataagtgaagaacag
ctgaaaccattactaaaagatatagatatcaagcatgaaaatgaaatggaatttgatgca
tttaatgtaaaacaagaatatctgggatatgaagaaccaatttcaattgatagcgacagt
gatagtgaatctgaacaatggttgatgcgtctttcacagagcagtcctggaaagcctttc
atgaaaatggcaaaaagccctaaagtagaaaatactcaagaagacagctcttacagccaa
ctggatgattttgtttgtatgagtaatttggattttgaagaaaatgatgataaagatgat
gatgatttcgttgatgatttaatttcattaaatttgcgaccacctgatgatgaaattcat
aaagtacctgatataacaaaaggtcgacaggctgaggataatgaatctgaagaattgttt
gaagatatagtttctaacaaacaaccagtaaaagataaggatgaaatagatggatacagt
atggaagaggtattgaaagaagcagatatgcttttaaaatcacccacacgagattcagtg
aagaaggcacaattaatagaacccattgctcatggaacaaaacataaatcaaaccagatc
aaaataatagaaatcaaaccaaaaagttcttcttcatcaaggcatcataaagacaaatct
tcatcaaaacgacacatttccaactcccaaaaggaagagcgtaagagaaagctgaaggaa
atagcttgcaaggagaaagaaactgaatcaatagagaatagagattcttcaacaaacaac
aaaccaatctccactaatgtgaagattactaccaccaaccgtggagcattcctaacagat
gtcgcacaagctattgtaaatccaataaaaagaaaagaacatgttcccaaaggtaaacaa
aaagatggagaaacctcgccgcaatcaaaagaggtaaaaggcaaagaaggtgatgtaaat
gaagatcttgaaaacaagagaaaagcgccagagaaaacaatcaaagacaagggtgaaagt
tcaaagcataaaaatcatagtaaagccgaaaacatacaagataaagttactccaaagcct
atggaaacggaaaaaaggttgcccttgaaaattataaaaccattaacagatggtgaatat
ttttctggcaagccagtgtccaaagtaggtcctctgaaaaacgaacaacagaagaaggtg
gtgcgattttcagaagtaccaccgcaagtcttagtgtttgaaatagaacctggcaacaga
atgaagaagacaagtttggtgaaaacaatggtcgacgtgcgtcaggcgccagtgttttca
ttagaaaaattgacgctaatgaaaatattacgatggaatcctcagtggtttgaggaacaa
ttaaataatactgagcctcctcccatactaggacataataatccgccgatgtctgttttc
cactcgttcgtgaatcataatcaatatgtacaattgataggagatttactgctaatggag
atttgggaatacttaacgttagcatatatgaagatacgtaatcagaacaacggaatagaa
ttgagaatagagtcgctgccgcctataccttcacacgaaagatgccttgaattatttagc
cttagtgttaatgtctctgtccctgaaaggggatccaaaatgcttcctagagtaggagaa
gtacttctggtaagttttggtccggaacatgccaaaaatcaacggtttttctacgtacac
aatgtcagatgtcttccatcacctccaagtaacaggcacgcattttacagtatatctcta
cacgctacctacactgataaaatgcgtacattaaaaccgggagagttaatgataggtaga
aacttagcttacatcaataaggagttgcagttatttgaagccatggaatatctggcggga
tcgccgctcagtgatgctatactcagaccggagccacaccattttgtaatgagtcagcaa
gttcagtcttttgatatgcaatcgcagtggacaagaacgctgaaccctagtcagttgacg
gcggtgagttcctccgtagcggcggcattgggcgacaaaccctctatacaaatggttcaa
ggcccacctggcaccgggaaatcaagtgtgatatgcgcaatcgtgatgacttacttctac
aacgcgcaagtgaagaaacaacagaacaggggtaaaatattaatatgtgcgacgagcaac
gccgctgtcgacggactagtcattagattactgaatctcagacaaagtttaccaaagtcg
gaaaggttccgcatggtccgcgtgggtcgagaggaagcgatgcatcccgaagccgccaac
atcagctcgcaacaactggccaagcgagaccttggcagaatcaactccgaccagcctccc
gcgcccgcaggacttaacgaagagattctacacatagaggcaaaaataaacatgtggaag
acccaagcccaggacgcgaaggaccaatcaagagtggcgtactgccagggtcgggtcgac
gacctcatgaagagaatggcattgctccgcacgggcccgggccgggcgggcggcgcggac
gcgctgcggccggagcagctggcgcacacggagcggcgcatcatcgagggcgccgacatc
gtcgtcaccacgctcgccagcgcacagaactataagatgaaagggctgaagcgtcgcata
gcgctgtgcatcatcgacgaggcggggcaggtgatggagccggagacgctggtgccgctc
acgctggacgtcacgcgcctcacgctcatcggcgacccgcagcagctgcccggcttcatc
tgctcacagcgagcgaaaaggcacggtctcaacgagagcctgttttctcgtctaagctca
tgtactgagcagtggcctagcggtagtcctgtggtactactgaatcaacaatatcgtatg
cagcctgatattgccgactatcctagtcgagccttctacgatggcaggataatcagtgta
ccgccaactaggccggatatcgatatacctgcatacaatattattagtatatccagtgga
gataaaggacaaggcttgtcgggcgcgaacgagctggaggcgtggggcgtgtcgcggctg
gtggcggcgctgctgccgcgcctgcgcccgcgccgcctgcgcctcgccgtcatcacgccc
tacaacgcgcacaaggacctcatcaagagacatctgcggacgctgcagctcggcgacaat
caggtggaggtgaacacggtggacagcttccaggggcaggagcgcgacgtggtggtggtg
tcgctggcgcggagccagggcgtgggcttcctgacggacgcgggccgcatgaacgtcatg
ctcacccgcgccaagcacgcgctgctcgtctgcctcaacccgcatgcgctcattaaaaac
catcagtggagaactctagtcgaagatgctcaacgaagaaacctgtatagagaactacca
aataaaatgtgccagccaataacagcggcacagttgcccagtgataatattttgagttat
ataacacataaaactcaccgttaa
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