Helicoverpa zea (corn earworm): 124638185
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Entry
124638185 CDS
T08400
Name
(RefSeq) general transcription factor IIH subunit 4 isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
hze
Helicoverpa zea (corn earworm)
Pathway
hze03022
Basal transcription factors
hze03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124638185
09124 Replication and repair
03420 Nucleotide excision repair
124638185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hze03021
]
124638185
03400 DNA repair and recombination proteins [BR:
hze03400
]
124638185
Transcription machinery [BR:
hze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124638185
DNA repair and recombination proteins [BR:
hze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124638185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
124638185
NCBI-ProteinID:
XP_047031034
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All DBs
Position
17:504153..513870
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AA seq
480 aa
AA seq
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MSESSKSKSSLNLNPSPTLQCKDLHEYLKSRSAQFLETLYNYPTICLAVYRELPELARHF
VIRLLFVEQPVPQAVVTSWVSQTFAKEQAKACEALSELSVWQEAPIPGGMPGWMLAQSFK
KNLKVALLGGGRPWSMSSSLEPDGKARDVAFLDAYALERWECVLHYMVGSAQTEGISADA
VRILLHAGLMTRDADDGSAVITRAGFQFLLLSTAKQVWLFLQHYLHTAEKRSLSAAECLA
FLYQLSFSTLGKDYSTEGMSNNMLVFLQHLREFGLVYQRKRKAGRFYPTRLALNIAAVRG
GSAGGAVSVAAPAQRGYILVETNYRVYAYTQTSLQVALLGLFTELMYRFPNLVVGVLTRE
SVRAALRGGITAEQIIHYLDQHSHPQMLKSETGGIRSSSTLPPTVVDQIKLWETERNRFT
YTEGVVYNQFLSQADFVVLRDYARQQGVLTWQSERSRTMVVTRHGHDDVKKFWKRYSKTS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatcctctaaatccaagtcttccttaaacctaaatccttcgcctactttacaa
tgcaaggatcttcacgaatatctaaaaagcagatctgcacagttcttagagacgctctat
aactatcctacaatatgtctagctgtttaccgtgagttgccagagctagctcgtcacttc
gttatcagactactgtttgtggagcagccagttcctcaggcagttgtcacctcctgggtc
tcacagacttttgccaaagagcaagccaaagcatgtgaagccctgtcagagctgtcagta
tggcaggaggctcccatacctgggggtatgcccggctggatgctggctcagtccttcaag
aagaacctcaaagttgcactacttggaggtggccgtccttggagtatgtcatcatcacta
gaaccagatggcaaggccagagacgtggctttcctagatgcctacgccctggagagatgg
gagtgcgtgctgcactacatggtgggcagtgcacagaccgagggcatcagtgctgacgct
gtgaggatactgttacatgctggattgatgaccagggatgcagatgatggatcagcagtt
atcactcgagctggcttccagttcctgctacttagcactgccaaacaagtatggttattc
ctgcaacactacttgcacacggcggagaagcgcagcctgagcgcggccgagtgcctcgcc
ttcctctaccagctcagtttcagtactcttggcaaggattacagtacagaaggcatgagt
aacaacatgttggtgttcctgcaacatctcagggagtttggacttgtatatcaaagaaag
cgcaaagcaggtcgtttctacccgactcggctagccctgaacatagcggcggtgcgcgga
ggaagtgcaggcggcgccgtgagcgtggcggcgccggcgcagcgcgggtacatactggtg
gagaccaactatcgcgtctatgcttatacgcaaaccagcctgcaggttgcattgttgggg
ctgttcactgagctcatgtataggttcccgaacctggtggtgggcgtgctgacgcgggag
tcggtccgcgcggcgctgcgcggcggcatcacggccgagcagatcatacactacctcgac
cagcactcgcatccacagatgttaaagtcagagacaggcggtattcggtcgtcgtcgacg
ttgccgccgaccgtggtcgatcagatcaagctgtgggagactgagcgaaaccgattcact
tacactgaaggcgttgtctataaccagttcttatcacaggcggacttcgtagtgctccgc
gactacgcgcggcagcagggcgtgctgacgtggcagagcgagcgatcccgcaccatggtc
gtcacccgccacggacatgatgacgtcaagaagttctggaagcggtactccaagacatcg
tag
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integrated database retrieval system
