Iamia sp. SCSIO 61187: HC251_13350
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Entry
HC251_13350 CDS
T07394
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
iam
Iamia sp. SCSIO 61187
Pathway
iam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
iam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HC251_13350 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iam03400
]
HC251_13350 (uvrA)
DNA repair and recombination proteins [BR:
iam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HC251_13350 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HC251_13350 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
AAA_21
nSTAND1
APS_kinase
DnaJ_CXXCXGXG
AAA_22
AAA_23
nSTAND3
DUF4350
Viral_helicase1
NACHT
ScfRs
cobW
Septin
Motif
Other DBs
NCBI-ProteinID:
QYG93312
LinkDB
All DBs
Position
complement(2800938..2803781)
Genome browser
AA seq
947 aa
AA seq
DB search
MSDTLVIRGAREHNLRGVDLDLPRDKLIVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAISIDQKSASRNPRSTVGTITEILKYLGLLFTNIGQPH
CPTHGAAITRQTPQQIVDRILELPEGTRFQVLAPVVRRRKGNYETMLADLAKQGFSRARI
DGEVVELGEKIDLARYENHTIEIVIDRLVKRDGIERRLTESLETALRLAEGVAEVQIVPR
EGEDEPESMTFSQHLACPVDGESFEELTTRSFSFNTPYGACPRCDGLGTRFEVDPELIVP
DPDLSISEGAIHPWSSGHATWFHRILEAVGEEKGIPLDVPWSKLKAAQQRTLLDGKGIGR
VEVRYKNRYGRVRTYKAAYEGVIPWLQRRHADTDSDTQREQFEGYMREVPCPECDGARFN
PFTVNVTVAGRNIAELSMLSIRELATVVDEIELTEREILISEAVLKEVKARLGFLLDVGL
DYLSLGRGTATLSGGEAQRIRLASQIGSGLVGVLYVLDEPSIGLHQRDNRRLIETLLRLR
QLGNTVIVVEHDEDTIAVADHVVDVGPGAGEHGGSIVHSGTYKQLLKNKRSVTGQYLTGA
RSIPIPEQRRAPSGDWLKIKGAREHNLDGVDVDIPLGLFVTVTGVSGSGKSTLVNDILLR
SLMQKIYRAKTPPGRHRRIDGIELLDKVISIDQSPIGRTPRSNPATYTGVWDAIRKLFAQ
TQEAKVRGYLPGRFSFNVKGGRCETCSGDGTIKIEMHFLPDVYVPCEVCKGARYNRDTLD
ITFKGKNVAEVLDLPCEEALEFFANQPAIARHMQTLVDVGLGYIRLGQPAPTLSGGEAQR
IKLASELSKRSTGHTIYLLDEPTTGLHFEDIRRLLTVLSRLVDQGNTVLVIEHNLDVIKT
ADWLIDLGPEGGSGGGRVVAEGPPEAVAEVDDSHTGRFLGELLAGRR
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggacaccctcgtcatccgcggcgctcgcgagcacaacctccggggtgtcgacctc
gaccttccccgcgacaagctgatcgtcttcaccgggctgtcgggctcggggaagtcgtcg
ttggcgttcgacacgatctacgccgagggccagcgtcgctacgtcgagtcgctgtcgtcc
tacgcccggcagttcctgggccagatggacaagcccgacgtggacttcatcgagggtctg
tcgccggcgatctcgatcgaccagaagtcggcgtcgcgaaacccccggtcgacggtcggg
accatcaccgagatcctcaagtacctcggcctcctgttcaccaacatcggccagccccac
tgcccgacgcacggtgccgccatcacccggcagacgccgcagcagatcgtcgaccgcatc
ctcgagctgcccgaggggacgcggttccaggtgctggcccccgtcgtgcggcgtcgcaag
ggcaactacgagaccatgctggccgacctggccaagcagggcttctcccgggcccgcatc
gacggcgaggtcgtcgagctgggggagaagatcgacctggcccggtacgagaaccacacg
atcgagatcgtcatcgaccgtctggtgaagcgggacggcatcgagcggcgcctcaccgag
tcgctggagaccgccctgcggctggccgagggcgtggccgaggtccagatcgtcccccgc
gagggtgaggacgagcccgagtcgatgaccttcagccagcacctggcctgcccggtcgac
ggtgagagcttcgaggagctcacgacccggagcttctcgttcaacacgccctacggcgcc
tgcccccgctgcgacggcttgggcacccgcttcgaggtcgaccccgagctgatcgtcccc
gaccccgacctcagcatctccgagggcgccatccacccgtggtcgagcggccacgccacc
tggttccaccgcatcctggaggccgtcggcgaggagaagggcatccccctcgacgtcccg
tggtcgaagctgaaggcggcccagcagcgcacgctcctcgacggcaagggcatcgggcgc
gtcgaggtccgctacaagaaccgctacggccgggtgcggacctacaaggcggcctacgag
ggtgtgatcccgtggttgcagcggcgtcacgccgacaccgacagcgacacccagcgggag
cagttcgaggggtacatgcgcgaggtgccgtgccccgagtgcgacggcgcccgcttcaac
cccttcaccgtcaacgtcaccgtcgccggccggaacatcgccgagctgtcgatgctctcc
atccgcgagctggccacggtcgtcgatgagattgagctcaccgagcgcgagatcctcatc
tccgaggccgtcctcaaggaggtcaaggcccggctcgggttcctgctcgacgtaggcctc
gactacctgtcgctgggccggggcacggccaccctctcgggcggcgaggcccagcgcatc
cggctggccagccagatcggatcgggcctggtcggcgtgctgtacgtgctcgacgagccg
tcgatcggcctccaccagcgcgacaaccgacgcctgatcgagaccctcctgcggttgcgc
cagctgggcaacaccgtgatcgtcgtcgagcacgacgaggacacgatcgccgtggccgac
cacgtggtcgacgtcggtcccggggcgggggagcacggcgggtcgatcgtccactccggc
acctacaagcagctgctgaagaacaagcgatccgtcaccggccagtacctcaccggggcg
cgctcgatcccgatccccgagcagcgacgggcccccagcggcgactggctcaagatcaag
ggcgcccgcgagcacaacctcgacggcgtcgacgtcgacatcccgctcgggctcttcgtc
accgtcaccggcgtgtccgggtcgggcaagtcgaccctcgtcaacgacatcctgctgcgg
tcgttgatgcagaagatctaccgggccaagaccccgccgggtcggcaccgccggatcgac
ggcatcgagctgctcgacaaggtcatcagcatcgaccagtcaccgatcggccgcactccc
cggtcgaacccggcgacctacaccggcgtgtgggacgcgatccgcaagctgttcgcccag
acccaggaggccaaggtccggggctacctgcccggccggttctcgttcaacgtcaaaggt
gggcgctgcgagacgtgctcgggtgacggcaccatcaagatcgagatgcacttcctgccc
gacgtctacgtgccctgcgaggtgtgcaagggggcccgctacaaccgcgacaccctcgac
atcaccttcaagggcaagaacgtggccgaggtgctcgacctgccatgcgaggaggcgttg
gagttcttcgccaaccagccggccatcgcccgccacatgcagaccctcgtcgacgtcggc
ctcggctacatccgcctcggacagccggcccccaccctctcgggcggcgaggcccagcgc
atcaagctggcgtcggagctttcgaagcggtccacgggccacaccatctacctgctcgac
gagccgacgacaggcctgcacttcgaggacatccggcggctcctcaccgttctctcccgg
ctggtcgaccagggcaacaccgtcctggtcatcgagcacaacctcgacgtcatcaagacg
gccgactggctgatcgacctcggacccgagggcggcagcgggggagggcgggtcgtcgcc
gagggcccacccgaagccgtcgccgaggtggatgacagccacaccggccgcttcctcggc
gagctcctcgccggacgtcgctga
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