Intrasporangium calvum: Intca_3553
Help
Entry
Intca_3553 CDS
T01385
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
ica
Intrasporangium calvum
Pathway
ica00061
Fatty acid biosynthesis
ica00071
Fatty acid degradation
ica01100
Metabolic pathways
ica01212
Fatty acid metabolism
ica02024
Quorum sensing
Module
ica_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ica00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Intca_3553
00071 Fatty acid degradation
Intca_3553
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Intca_3553
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ica01004
]
Intca_3553
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ica04147
]
Intca_3553
Enzymes [BR:
ica01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Intca_3553
Lipid biosynthesis proteins [BR:
ica01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Intca_3553
Exosome [BR:
ica04147
]
Exosomal proteins
Exosomal proteins of breast milk
Intca_3553
Exosomal proteins of breast cancer cells
Intca_3553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Prot_ATP_ID_OB_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ADU50026
UniProt:
E6S6K9
LinkDB
All DBs
Position
3914975..3916483
Genome browser
AA seq
502 aa
AA seq
DB search
MTNLATNLVATATRLPDKVGIKLDQAEVTWSQLHGAAAKVAGQLREAGLEPGDRVSLILP
NVPAYPVLFYGTLLAGGIVVPMNPLLKSGEIAYYFQDAGTSFSFVWPDFAEEARKGAQIA
AGEGVTTQVIECTAMGPAAGALPDADPLPEPVERADDDTAVILYTSGTTGKPKGAELTHF
NLHRNAARSSDDVMVMTEDDVIMGCLPLFHVFGLTCGLNTSVLRGCTLTLIPRFDPAKAL
EVVGRDHVTIFQGVPTMYAAMLNHPDADAAETSSLRTCVSGGSALPEAVMRNFEQKFDAQ
ILEGYGLSETSPVASFNMPDRPTKPGTIGRAIPGCEMKLVNLDGTDTAPGEIGEIAIRGE
NVMKGYWGKPEATAEAIPDGWFRTGDLATVDEDGYFTIVDRKKDMIIRGGMNVYPREVEE
VLYTHPDVLEAAVVGIPDDVMGEEIGAAVALKPGSETTLDEVQEYVKERIAAYKYPRRLW
RLDELPKGPTGKILRREVRPPA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatctcgccacgaacctcgtcgccaccgccacgaggctgcccgacaaggtcggc
atcaagctggaccaggccgaggtcacctggagccagctgcacggcgcagcggcgaaggtc
gccggccagctgcgcgaggccggtctcgagcccggggaccgcgtctcgctcatcctgccc
aacgtgcccgcgtacccggtcctcttctacggcacgctcctcgcggggggcatcgtcgtg
ccgatgaacccgctcctcaagagcggcgagatcgcgtactacttccaggacgccggcacg
agcttctctttcgtctggccggacttcgccgaggaggcgcgcaagggcgcccagatcgcc
gcgggcgagggcgtcaccacgcaggtcatcgagtgcaccgcgatgggaccggccgcgggc
gccctgccggacgccgacccgctgcccgagccggtggagcgcgctgacgacgacaccgcg
gtgatcctctacacctccgggacgacgggcaagcccaagggcgccgagctgacccacttc
aacctgcaccggaacgcggcccgctcctcggacgacgtcatggtgatgaccgaggacgac
gtcatcatgggctgcctgcccctcttccacgtcttcgggctgacctgtggcctcaacacg
agcgtcctccgcgggtgcaccctgacgctgatcccccgcttcgacccggccaaggcgctc
gaggtcgtgggccgggaccacgtcacgatcttccagggcgtcccgacgatgtacgccgcg
atgctgaaccatcccgacgccgacgcggcggagacgtcgagcctgcgcacctgcgtctcc
ggggggtccgccctgccagaggccgtgatgcgcaacttcgagcagaagttcgacgctcag
atcctcgagggctacggcctgtccgagacctcccccgtcgcgtccttcaacatgcccgac
cggccgacgaagccgggcacgatcggccgggcgatccccggctgtgagatgaagctggtc
aacctcgacggcaccgacacggctccgggggagatcggcgagatcgcgattcgcggcgag
aacgtcatgaagggctactggggcaagccggaggcgacggccgaggcgatccccgacggc
tggttccgcaccggtgacctcgcgacggtcgacgaggacggctacttcaccatcgtcgac
cggaagaaggacatgatcatccgcggcggcatgaacgtctacccccgcgaggtcgaggag
gtgctctacacgcacccggatgtcctcgaggccgccgtcgtcgggatcccggacgacgtg
atgggtgaggagatcggtgccgccgtcgcgctgaagccgggctcggagacgacgctcgac
gaggtccaggagtacgtcaaggagcggatcgccgcctacaagtacccccgtcggctctgg
aggctcgacgagctgccgaagggccccaccggcaagatcctgcgccgcgaggtacgcccg
ccggcctga
DBGET
integrated database retrieval system
