Ideonella dechloratans: LRM40_01975
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Entry
LRM40_01975 CDS
T07737
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
idc
Ideonella dechloratans
Pathway
idc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LRM40_01975 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
idc03400
]
LRM40_01975 (priA)
Enzymes [BR:
idc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LRM40_01975 (priA)
DNA repair and recombination proteins [BR:
idc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LRM40_01975 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
PriA_CRR
Helicase_C
AAA_30
AAA_16
Glycos_transf_2
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
UFU10504
LinkDB
All DBs
Position
407971..410130
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AA seq
719 aa
AA seq
DB search
MRLGVAVDAPQYAALGDVLHYLSAQAVPPGSLLRVPLGRRDTLGLVWEQVSEDVPQDPGV
TLRPVGEALACLPPLGEAWLRLVEFTARYYQRALGEVALSVLPPELRKLDDTALAKRLAR
LRRQWGLPAPEGEAVPKKRRRAAAAVEAAPPAPLPEPERPPLMPDQATVLEAIAAQFAAE
TPTCQLLHGVTGSGKTEVYLRAAEAALAAGKQALVLVPEINLTPQLEARFAERFPGRRLV
SLHSGLTPAQRLLNWLGAHLGHADLVLGTRLAVFCPLPRLGLIVVDEEHDPSYKQQDGAR
YSARDLAVYRGRLEKVPVLLGSATPSLESWQQARTGRYQLLAMPHRVGQGELPKVRVVDM
AQQPKPPQGREPPPLCPPVLAAVQERVSRGEQSLLFLNRRGFAPVLHCAACGWKSGCPHC
SAWRVFHKGDRTLRCHHCGFTERVPTACPDCGNLDIEPMGRGTERLEEQMVALLEGVQRP
DGSPARVARIDADTTRLKGSLEQQLAAVHAGEVDVLVGTQMITKGHDFRNVTLVAAVNPD
SALYAADFRAPERLFSSLMQAAGRAGRDAEAAARSEMWIQTWTPGHALFAALRQHDYAAF
AASQLDEREMAGLPPFSHLALLRAEARDPAVAEAFLRAARETARAWLAEHGEPPVMLYAP
VPPQIAKVAGLERRQMLLEAGHRGALQRLLADWVPGLHALRAAHRGLARWAIDVDPLSI
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgggcgtggcggtcgatgcaccgcagtacgccgccctgggcgatgtgctgcac
tacctgtcggcgcaggccgtgccgccgggcagtctgctgcgcgtgccgctgggccggcgc
gacaccctgggcctggtctgggagcaggtgtccgaggacgtcccccaggacccgggcgtg
accttgcgcccggtgggcgaggcgctggcctgcctgccgccgctgggcgaagcctggctg
cgtctggtcgagttcaccgcgcgctactatcagcgcgccctcggcgaggtggcgctgtcg
gtgctgccgccggagctgcgcaagctcgacgacaccgccctggccaagcgcctggcccgc
ctgcgccgccagtgggggctgccggcgcccgagggcgaggccgtgcccaagaagcgtcgg
cgggccgccgcggccgtggaggccgcccctccggcgccgctgcccgagcccgaacgcccc
ccgttgatgccggaccaggccacggtgctggaggccattgcggcccagttcgcggccgag
acgcccacctgccagctgctgcacggcgtcaccggcagtggcaagaccgaggtctatctg
cgtgccgccgaggccgcgctggcggccggcaagcaggccctggtgctggtgcccgagatc
aatctcacgccgcagctggaggcccgctttgccgagcgcttcccgggccggcgcctggtg
tcgctgcacagtggcctcacgccggcgcagcgcctcctgaactggctgggcgcccacctg
ggccatgccgacctggtgctgggcacccggctggccgtcttctgcccgctgccgcgcctg
ggcctgatcgtggtcgacgaggagcacgaccccagctacaagcagcaggacggcgcccgc
tactcggcgcgcgacctggccgtctaccgcggccggctggaaaaggtgcccgtgctgctg
ggctcggccacgccctcgctggaaagctggcagcaggcccgcaccggccgctaccagctg
ctggccatgccgcaccgggtggggcagggcgagctgcccaaggtgcgggtggtggacatg
gcccagcagcccaagccgccgcaggggcgagagccgccgccgctgtgcccgccggtgctg
gccgccgtgcaagagcgggtcagccgcggcgagcagagcctgctgttcctgaaccggcgc
ggcttcgcgccggtgctgcactgcgcggcctgcggctggaagagtggctgcccgcattgc
agcgcctggcgcgtcttccacaagggcgaccgcacgctgcgctgccaccactgcggcttc
accgaacgggtgcccaccgcctgcccggactgcggcaacctggacatcgagcccatgggc
cgcggcaccgagcgcctggaggagcagatggtggccctgctcgaaggcgtgcagcgtccg
gacggcagcccggcccgcgtggcccgcatcgacgccgacaccacgcgcctgaagggcagc
ctggagcagcagctcgccgccgtgcatgccggcgaggtggatgtgctggtgggcacgcag
atgatcaccaagggccacgatttccgcaacgtgaccctggtggccgcggtcaaccccgac
agcgcactctacgcggcggacttccgcgcgcccgagcgcctgttctcctcgctgatgcag
gccgccggccgggccggccgcgacgccgaggccgcggcgcgcagcgagatgtggatccag
acctggacgcccggccacgccctgttcgccgcgctgcgccagcacgactacgccgccttc
gcggccagccagctggacgaacgcgagatggccggcctgccgcccttcagccacctggcc
ctgctgcgggccgaggcccgcgacccggccgtggccgaggcctttctgcgcgccgcccgt
gaaaccgcccgggcctggctggccgagcacggcgagccgccggtgatgctttacgccccg
gtgccgccgcagatcgccaaggtggccgggctggagcggcgccagatgctgctggaggcc
ggccaccgcggcgccctgcagcgcctgctggccgactgggtcccgggcttgcatgccctg
cgcgcggcccaccgcggcctggcccgctgggccatcgacgtcgacccgctgtccatctga
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