Ideonella dechloratans: LRM40_02160
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Entry
LRM40_02160 CDS
T07737
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
idc
Ideonella dechloratans
Pathway
idc00521
Streptomycin biosynthesis
idc00523
Polyketide sugar unit biosynthesis
idc00541
O-Antigen nucleotide sugar biosynthesis
idc01100
Metabolic pathways
idc01110
Biosynthesis of secondary metabolites
idc01250
Biosynthesis of nucleotide sugars
Module
idc_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
idc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
LRM40_02160 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LRM40_02160 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LRM40_02160 (rfbC)
Enzymes [BR:
idc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LRM40_02160 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UFU10539
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Position
460883..461422
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AA seq
179 aa
AA seq
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MKAIQTDIEDVLILEPRVFGDARGFFMESFNAKTFNELVGHEVNFVQDNHSRSAKGVLRG
LHFQKAPHAQGKLVRVTAGAVFDVAVDIRKDSPSFGRWVGVELSADNHRQFWIPPGLAHG
FLVLSESADFLYKTTDYYAPQAEGALRWDDPDLAIAWPDIGMAPQLSAKDAVAGFLRDL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgatccagacggacatcgaggacgtgctgatcctcgaaccccgggtcttcggc
gacgcgcgcggcttcttcatggaaagcttcaacgccaagaccttcaacgagctggtgggc
cacgaggtgaacttcgtgcaggacaaccactcgcgctcggccaagggcgtgctgcgcggg
ctgcacttccagaaggccccgcatgcccagggcaagctggtgcgggtgacggctggggcg
gtgttcgacgtggcggtggacatccgaaaggacagccccagcttcggccgctgggtgggg
gtggagctgagcgcggacaaccaccgccagttctggatcccgccggggctggcgcacggc
tttctggtgctcagcgagagcgcggacttcctctacaagaccaccgactactacgcgccg
caggccgaaggcgcgctgcgctgggacgacccggacctggccatcgcctggcccgacatc
ggcatggccccgcagctctcggccaaggacgccgtcgccggcttcctgcgcgatctttga
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