Idiomarina sp. X4: CWC33_05420
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Entry
CWC33_05420 CDS
T05226
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
idi
Idiomarina sp. X4
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
idi03009
]
CWC33_05420
Enzymes [BR:
idi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
CWC33_05420
Ribosome biogenesis [BR:
idi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CWC33_05420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_31
Methyltransf_25
FtsJ
Methyltr_RsmF_N
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
ATZ73171
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Position
1124638..1125966
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AA seq
442 aa
AA seq
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MSESNKSESKGSGATSRAAAATALFQVLEKGESLSTALPNATAKLSPQDKRLASAISYGV
LRVLPTLNKLVGAKLQQPLKGKLKVLHYLLLVGAYQLYCQRIKDHAAVSATVEAAVVLKK
RSNKALINGVLRQLLREAPDADENFERHLPEDNAHNHPRWLVQQFETDHGDKAASILREN
NQHPPMWLRVNERQFSRDDYMAQLKSEGIDAVPDTEARNAIKLLTPCPVDKLPHFHDGAV
SVQDRSAQLAADYLNVDNSHRVLDCCAAPGGKLLHLLERHSFDCPVHAVELDANRIERIN
ENLARQQLSAEVHCADAADPSKWWDGKPFDRILLDAPCSATGVIRRHPDIKWLRRQSDIT
ELAELQGHILNALWETLTPGGELLYATCSVMRVENQSQIETFLKQHSDATLIPIEPDQTM
VQILPGDADGDGFFYARLKKAQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtcaaacaaaagtgagagcaaaggatcaggtgcaacgagccgagctgctgca
gcgactgcgcttttccaggtattagaaaaaggcgagtcgttatccactgcgctgcccaac
gccaccgcaaagctttccccgcaggacaaacgtttagcgagtgcaattagctacggcgtg
ttgcgcgttcttcctacgttaaacaagcttgttggcgccaagctgcaacagccacttaaa
ggcaaactgaaagttctgcactacctgctattggttggtgcgtaccagctctattgtcag
cgtatcaaagaccacgctgcagtgagcgcaacggttgaagctgccgttgtgttgaaaaag
cgcagtaacaaagcgcttataaacggagttttgcgccagctattacgcgaagcgccagac
gccgatgagaactttgagcgccacttacctgaggacaacgctcacaaccaccctcgttgg
ttagtacaacagtttgaaactgaccacggcgataaagcggcatcaattctcagggaaaat
aaccagcaccctccgatgtggcttcgcgttaacgagcgccagttctcccgcgatgactat
atggcgcaactgaaaagcgaaggtattgacgcggtgccagacacggaagcacgtaacgcg
attaaattgctaacgccatgccctgtcgataaattacctcattttcatgacggcgctgtg
tctgtgcaagatcgctcggcacaactggccgctgactatcttaatgtggataacagccac
cgggtactcgactgctgtgccgcgccgggcggaaaacttttacacttattggaaaggcac
tcttttgactgcccggttcacgctgtcgaacttgacgcaaaccgaatagaacgcatcaac
gagaacttagcacgccagcagctttcggcagaggttcactgtgcggatgcggccgacccg
tcaaagtggtgggacggcaagccttttgaccgcatattattagatgcaccctgttctgcg
actggcgtaattcgtaggcacccggacatcaaatggctgcgtagacaaagtgatatcacc
gagcttgccgaacttcagggccacatactgaacgcattatgggagacgcttactcccggg
ggcgaactcctttacgcaacttgttcagtgatgcgggtagagaatcagtctcagatagag
actttcctaaagcagcacagcgatgctactctcatacccatagagccggatcagaccatg
gttcaaattttgccaggtgatgctgacggcgacggcttcttttacgcgagacttaaaaaa
gcacaatga
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