Idiomarina sp. X4: CWC33_12435
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Entry
CWC33_12435 CDS
T05226
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
idi
Idiomarina sp. X4
Pathway
idi01501
beta-Lactam resistance
idi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
idi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CWC33_12435
01503 Cationic antimicrobial peptide (CAMP) resistance
CWC33_12435
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
idi02000
]
CWC33_12435
01504 Antimicrobial resistance genes [BR:
idi01504
]
CWC33_12435
Transporters [BR:
idi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CWC33_12435
Antimicrobial resistance genes [BR:
idi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CWC33_12435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
ATZ74456
LinkDB
All DBs
Position
2569988..2573089
Genome browser
AA seq
1033 aa
AA seq
DB search
MAKFFINRPIFAWVIALLVMMAGAIATIQLPVAQYPTIAPPAVEIQVNYPGANAETVSDT
VTKVIEQNMTGIDNLLYFSSQSNFGNATISLTFASGTDPDIAQVQVQNKLSQATPQLPQE
VQAQGITVSKSSSSFLMVLALVATDDRYNQTDLSDYIASNIQDPIARTTGVGNVQLFGAP
YAMRIWVDPSALVNYGMTMDDLKSSIRAQNAQVAAGELGGTPAVDGQQLNATIIAQTRLS
EASEFENITLKVMPDGSQVRLKDVARVEKGAENYSIEANYNGKPATGLAINLQTGANALE
TAEAVNARIEELQAFFPDGMKMVTAYDTTPFIKISISEVAQVLIEAIILVFLLMFVFLQN
LRATLIPTLAIPVVILGTMGVMALAGFSINTLTMFGMVLSIGLLVDDAIVVVENVERLMS
EEGLSPKQATIKSMGQITGALIAIGVVMAAVFAPMAFFPGSTGAVYRQFSLTIITSMGLS
VLVAIIFSPALCATLLKPVKHDKNDGWGPLGWFNRTLEKWTVKYTNSVGYILRRTMRFGL
IYLGIIGVLIFLFTRLPAAFLPDEDRGVFLTQMQLPVGSTLQQSVDTMDKIENYYLNQED
AVQSVFSVVGFSFSGRSQANGIAFVRLKDWSERDESQSVEAVIGRAFGFFAGIKEAMIFA
FNLPPIPELGVASGFNLFLQDRGNIGHAGLIEARNQLLGMASQSDKLVQVRPNGLPDAPQ
LRIDIDFEKAQALGLTIASINDTLSTAWGSAYVNDFIDRGRVKKVYIQGEADDRMLPEDI
NEWYVRNNQGDMVPFSSFASWEWTYGPQRVESYNGVAALEIQGQAAPGISTGEAMTEIEN
LIAQLPPGIGFEWTGISLQERQSGNFAPILYTVSIVVVFLFLAALYESWSIPFSVMLVVP
LGILGAVIAVMLRGISNDVYFQVGLLTTVGVSARNAILIVEFAKDLQAQGKELLDATMEA
VRLRLRPILMTSLAFIFGVMPLALSDGAGAASRNAIGTGVIGGMIGGTVLAIFFVPLFFY
VVRKIFPPKEVEE
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttttttatcaatcgacccatatttgcctgggttatcgcgctattagtcatg
atggcaggtgctatcgcgaccattcagttaccggtagctcagtaccccaccattgcgccg
ccagcggttgaaatacaagttaactacccgggagccaatgcggaaaccgtttccgatacg
gttactaaagtaattgagcagaatatgacaggtattgataacctgctttacttctcatcg
caaagtaactttggtaacgcgactatcagcctgacctttgcctctggcactgaccctgac
attgcacaggtacaggttcagaataagctctcccaggccacgcctcagcttcctcaggag
gttcaggcgcaaggtataaccgtcagtaagtccagtagctccttccttatggttttagcg
ctggttgcaactgatgatcgttataatcaaaccgatttaagcgactatatcgcctcaaac
atccaggatcctattgcccgtacaactggcgttggtaatgtgcaactgtttggtgcgcct
tacgctatgcgtatttgggttgacccttcagcattagttaactatggcatgaccatggac
gacttgaagtcgtcaattcgcgcacagaatgcgcaagtggcagcaggtgaacttggcggg
actccggctgttgacggtcaacagctgaacgcaacgattattgcgcaaacacgtttatca
gaagcgtctgagtttgagaatattactcttaaagtcatgccagacggttctcaagtacgc
ttgaaggacgtagcacgcgttgaaaaaggcgctgaaaactactcaattgaagcgaactat
aacggtaaaccagcaaccggtttagcaattaatctgcaaactggcgccaatgcacttgaa
acggctgaagcggttaacgctcgtatagaagaactacaagcatttttccccgatggcatg
aaaatggtaacggcctatgacaccacgccgtttatcaaaatatccatttcggaagtggct
caggttttaatagaagcgattattctcgtattcctgttaatgttcgttttcttacaaaac
ctgcgagcaacactgatccctactctggctatacctgtcgttattcttggtaccatgggt
gttatggcactggctggcttttctatcaacacgctaaccatgtttggcatggtgttatcg
ataggtcttttggtggatgatgccatcgttgttgtcgagaacgtcgagcgactgatgtca
gaagaaggcttgtcacctaaacaggcaaccattaagtcgatgggacaaattaccggcgcg
ttgattgctatcggcgtggttatggcggccgtatttgcaccaatggcattcttccccggc
tcaaccggtgccgtttaccgacagttctcactgacaattattacctctatgggtctgtct
gtacttgtcgcaattattttctcaccagccttgtgtgcgacactattaaagccggtcaag
cacgacaaaaacgacggctggggtccactgggttggtttaaccgtactttggaaaagtgg
acagttaagtacaccaactctgtcggttatatattacgccgaaccatgcgtttcgggctt
atttatttaggtattattggcgtattaattttcttattcacgcgcctgccggccgcattc
ctaccggatgaagaccgtggtgttttcctaacgcaaatgcagcttcctgttggatcaacg
ctgcaacaatcagtagacaccatggacaaaattgagaactactatctcaatcaggaagac
gccgttcagtcggtattctctgtggttggttttagtttctctggccgtagtcaggccaat
ggtatcgcgtttgttcgcttgaaagattggagcgagcgtgacgagagccagagcgtcgaa
gctgtgattggacgggcttttgggttcttcgctggtattaaagaagccatgatcttcgct
tttaaccttccaccaattccggaacttggtgtagccagtggtttcaacttgttcttacaa
gatcgcggcaacattggtcacgcaggtcttattgaagcgcgtaatcaattactaggcatg
gcctctcaaagcgataaattagtacaggttcgtcctaacggtctgcctgacgcgccacag
ttgcgcattgatatcgactttgaaaaagcacaagcgctgggcttaacgattgccagtatt
aacgacactttaagtacggcctggggctctgcctatgtcaacgactttatcgaccgaggt
cgagtgaaaaaagtttacatacaaggcgaagcggatgatcgcatgctacctgaggatatc
aacgaatggtacgtgcgcaacaaccagggcgatatggtgccgtttagctctttcgcaagt
tgggaatggacgtatggtccacaacgtgtcgaaagttataacggtgtcgcagcacttgaa
atacaaggtcaggcggcgcctggtatcagtaccggtgaagccatgaccgaaattgagaac
cttattgctcaattgccaccaggtattggctttgaatggacgggtatctcattgcaggag
cgtcaatctggtaactttgcgccgatactctacaccgtctctattgtcgtggtattcctg
ttcctggctgcactgtacgagagttggtcaattccgttctccgtcatgctggttgtgccc
ttggggatcttaggggcggtaatcgccgtgatgctgcgtggcatttccaacgacgtatac
ttccaggtgggtctattgacaactgtcggggtatcggcacgtaatgccatactcattgtc
gagttcgccaaagacctacaagctcagggcaaagagctgctcgacgctacaatggaagcg
gtcagattgcgtctacgccctattttaatgacctcactggcgtttatcttcggtgttatg
ccattagcgttaagtgatggtgccggcgctgccagtcgtaatgccattggtactggggtt
atcggcggtatgataggcggaacggtactggcaatattttttgtaccgttattcttctat
gtggtgagaaaaatcttcccaccgaaagaagtggaagaatag
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