Idiomarina sp. OT37-5b: C5610_05310
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Entry
C5610_05310 CDS
T05379
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
idt
Idiomarina sp. OT37-5b
Pathway
idt01501
beta-Lactam resistance
idt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
idt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C5610_05310
01503 Cationic antimicrobial peptide (CAMP) resistance
C5610_05310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
idt02000
]
C5610_05310
01504 Antimicrobial resistance genes [BR:
idt01504
]
C5610_05310
Transporters [BR:
idt02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C5610_05310
Antimicrobial resistance genes [BR:
idt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
C5610_05310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
AVJ55786
UniProt:
A0A2S0IKI1
LinkDB
All DBs
Position
complement(1145997..1149098)
Genome browser
AA seq
1033 aa
AA seq
DB search
MAKFFINRPIFAWVIALLTMMAGAIATLQLPVAQYPTIAPPAVEIQYNYPGANAETVANT
VTKVIEQNMTGIDNLLYFSSQSNYGNGSISLTFASGTDPDIAQVQVQNKLSQATPQLPQE
VQAQGITVSKSSSSFLMVLALVATDDRYTQTDLSDYIASNIQDPISRTTGVGNVQLFGAP
YAMRIWVDPAAMVNYGLSMAELKDAIRAQNAQVAAGELGGTPAVDGQRLNATIIAQTRMS
DPEQFENITLKVLPDGSQVRMKDVAEVELGAENYSINANYNGKPATGLAINLQTGANALE
TAEAVKARVAELERFFPDGMEMVTAYDTTPFIKISISEVAQVLIEAIILVFLLMFVFLQN
LRATLIPTLAIPVVILGTMGVLSLAGFSINTLTMFGMVLSIGLLVDDAIVVVENVERLMS
EEGLSPKQATIKSMGQITGALVAIGVVMAAVFAPMAFFPGATGAVYRQFSLTIITSMGLS
VLVAIIFSPALCATLLKPVKHDKSDGWGPLGWFNRTLEKATVKYTNSVHGILRRTLRFGL
LYLGIIAVLAYLFTRLPAAFLPEEDRGVFLTQMNLPVGSTIEQSNAVMDKIENYYLQQED
AVQSVFSVVGFSFSGRSQANGIAFVRLKDWSERDESQSVQAVIGRAFGFFATIKEAMIFA
FNLPPIPELGTANGFDLYLQDRGNLGHAELMQARNQLLGMASQSDLLMQVRPNGLEDAPQ
LKIDIDFEKAQALGLTIASINDTLSTAWGSAYVNDFIDRGRVKRVYLQGEADARMLPQDI
NDWYVRNNQGDMVPFSSFSSWEWTYGAQRIESYNGVPALNIQGQPAPGVSTGEAMTEMER
LISQLPTGTGYEWTGISLQERQSGDFAPILYTISLVVVFLFLAALYESWSIPFSVMLVVP
LGILGAVLAVMLRGISNDVYFQVGLLTTVGVSARNAILIVEFAKDLQAQGKELLEATLEA
VRLRLRPILMTSLAFIFGVMPLALSDGAGAASRNAIGTSVIGGMIGGTILAIFFVPLFFY
VVRKIFPVKPETE
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttttttattaaccgccccatttttgcctgggttattgccctgctgacaatg
atggcaggtgcgattgcaaccttacagttgccggtagcgcagtaccctaccatcgcgcca
ccagcggtcgaaattcagtataactaccccggtgccaatgccgagaccgttgccaatacg
gtaaccaaggtcatcgagcaaaacatgaccgggattgataacctgctgtacttctcgtca
cagagtaactacggcaacggtagcatcagcctgaccttcgcatcgggaacggatcccgac
attgcgcaggtacaggtgcagaacaagctgtcacaagcgacgccgcagttgcctcaggaa
gttcaggcgcagggcatcaccgtcagtaaatccagcagttcgttcttgatggtactggcg
ctggtggcaaccgatgaccgctacacccaaaccgacttaagcgactacatcgcgtccaat
attcaggatccgatttcgcggaccacgggtgtcggtaatgtacagctgttcggtgcccct
tatgcaatgcgcatctgggttgaccctgccgcgatggtcaattatggcctcagtatggcc
gagcttaaagacgcgattcgcgcccagaacgcgcaggttgctgccggtgaactcggtggt
accccggcggttgacggccagcgtttgaacgccaccatcatcgcacagacgcggatgtct
gatccggagcagtttgagaacattaccctgaaggttctgcccgacggctcgcaggtgcga
atgaaggacgttgctgaggttgaactgggcgccgagaactattccattaatgccaactac
aacggcaaaccggctaccggtctggcgatcaatctgcaaaccggcgccaacgcactggaa
actgccgaagcggttaaagcgcgtgtcgccgaactggaacgtttcttcccggacggcatg
gagatggtcaccgcctatgacaccacgccgttcattaagatctctatttcggaagtcgca
caggtactgatcgaggccatcattctggtgttcctgttgatgtttgtgttcctgcagaac
ttgcgggcaacgctgataccaacgttggcgataccggtggttattttaggtaccatgggc
gtgctgtccctggccggcttctcgatcaacacgctgacaatgttcggtatggtgctgtcg
ataggtctgttggttgatgacgccatcgtggtggtcgagaacgttgaacgtttgatgtcc
gaagaaggcttatcgcccaaacaggcgaccatcaagtcgatgggtcaaatcaccggcgct
ctggttgcgattggtgtggtcatggcggcggtgtttgcaccgatggcgttcttccccggc
gctaccggcgcggtttatcgccaattttcactgaccatcatcacctcgatggggctgtcg
gtgctggttgcgatcattttctcaccggcgctgtgtgcgaccctgctaaaaccggtcaag
cacgacaaaagcgacggctggggaccgctgggctggtttaaccggacgctggaaaaagcc
accgtcaaatacaccaactcggtgcacggcattttgcgtcggacactgcgctttggtctg
ctctacctggggatcatcgcggtgttggcttatttatttacccgcttaccggcggcgttt
ctgccggaagaagaccgtggcgtgttcttaacccagatgaacttgccggtcggctccacc
attgagcagtcaaacgcggtaatggataagatcgagaactactatctgcagcaggaggac
gcggtacagtcggtgttctcggtggttggatttagcttctccggtcgtagccaggcaaac
ggtatcgccttcgtgcgtcttaaagactggtctgagcgtgacgaaagccagagcgtgcaa
gcggtcattgggcgtgccttcggcttcttcgcgaccattaaagaagcaatgatttttgcc
tttaacttaccaccgatcccggaactgggtaccgccaacgggtttgatctgtacctgcag
gaccgcggcaacctcggtcatgcggaactgatgcaggcacgtaaccagctgctgggtatg
gcaagccagagtgatctgttgatgcaggtgcggcccaacggcctggaagatgcgccacag
cttaaaatcgacatcgattttgagaaagcacaggcattggggctgaccattgccagcatc
aacgacaccctgagtaccgcctggggctctgcctacgtcaatgactttattgaccgtggt
cgggtaaaacgtgtgtacttgcagggtgaagcagatgcgcggatgttgccgcaggacatc
aacgactggtacgtacgcaacaatcagggtgacatggtgccgttcagctcgttctcgagc
tgggaatggacctacggtgcacagcggattgagagctacaatggcgtaccggcactgaac
attcagggtcagccggcaccgggtgtaagcaccggtgaagccatgaccgagatggaacgt
cttattagccagttgccgaccggcaccggctatgagtggaccggtatctcgttgcaggaa
cgccagtcgggcgacttcgcccctatcctgtacaccatttcgctggtggttgtgttcctg
ttcctggccgcactgtacgagagttggtcgattccgttctcggtgatgctggtggtaccc
ttgggtattcttggcgcggtactggcggtgatgttacgtggcatctctaacgacgtgtac
ttccaggtggggctgttaaccaccgtcggggtatccgcgcgtaacgccattttgatcgtc
gagttcgcaaaagacctgcaggcacagggtaaagagctgttagaagcgacgctggaagcg
gtgcgtctgcgtctgcgtccgatcctgatgacctcactggcgtttatctttggtgttatg
ccactggcgctcagtgacggcgcaggtgcagccagccgtaacgccatcggtaccagtgtt
atcggcggtatgattggcggtacgattctcgctatctttttcgtccccttgttcttctat
gtggtacgtaagatattcccggtcaaacctgagaccgaataa
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