Ischnura elegans (blue-tailed damselfly): 124159193
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Entry
124159193 CDS
T09104
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
iel
Ischnura elegans (blue-tailed damselfly)
Pathway
iel03022
Basal transcription factors
iel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
iel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124159193
09124 Replication and repair
03420 Nucleotide excision repair
124159193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iel03021
]
124159193
03400 DNA repair and recombination proteins [BR:
iel03400
]
124159193
Transcription machinery [BR:
iel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124159193
DNA repair and recombination proteins [BR:
iel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124159193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Motif
Other DBs
NCBI-GeneID:
124159193
NCBI-ProteinID:
XP_046390788
LinkDB
All DBs
Position
5:complement(86714406..86729576)
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AA seq
465 aa
AA seq
DB search
MADEEDGKEYRWETGYEKTWEAIKEDEGGLLEASVAEEITAQRAKQRRLLAQRQHELWGG
VRLGMMRHMYVVVDFSDAMSDQDLKPTRYLCTMKLLEGFVEEYFDQNPISQMGIIITRNK
RAEKICDLAGNPRKHIKLIQQLAAQAWSGGGEPSLQNALELAHSSLKLLPSHASREILIL
LGSLTTCDPGDINVTIEQLRKVGIRCSVIGLAAEVHICKLLARVTGGDFGVALDDIHFRE
LLLQHVLPPPSANPSSSSNGAPAPTAEASLVKMGFPQHHVSGLPSTDGVTKQPPQQVALT
MCMCHLDSKEEDDAAAASRTSSGGYFCPQCCSKYCELPVECKACGLALVSAPHLARSYHH
LFPVAPFTELPLTPDSGIVSCHSCLYRFTQLDKMGYRCETCFQTFCLECDLFIHDTMHVC
PGCASNRQTYGLAGSASSQVATGSSSGVLPVLGMSKLSSGIRSTH
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgaggaagacggaaaagaatatcgttgggaaacaggttatgagaaaacatgg
gaagccattaaggaggatgaaggtggtttgcttgaggcatctgtggctgaagagataact
gcacaacgagccaaacagcgcaggctactggctcagaggcaacatgaattatggggtggt
gtgaggctgggaatgatgcggcatatgtatgtcgttgtggatttttctgatgccatgtct
gatcaggatcttaaaccaactcgatatttgtgtacaatgaagttgctagaaggatttgtt
gaagagtattttgatcagaatccaataagccaaatggggataattattacccgtaacaag
agggctgaaaagatatgtgacttagctgggaacccaaggaagcacattaagttgattcag
cagcttgctgcgcaagcatggagtggaggtggagaaccttccttgcaaaatgccttagaa
ctggcccactcctctctgaagcttctgccgtctcatgccagtagagaaattctgattctt
cttggaagccttaccacctgtgatcctggggatattaatgtaacaattgagcaactaagg
aaggtgggaatcaggtgctcagtgattgggctggctgccgaagtacacatatgcaagttg
ctggctagagtcactggtggagacttcggtgtcgccctcgatgatatccacttcagggaa
cttctgctgcaacatgttcttccccctccttctgcaaatccttcctcgtcgtccaatgga
gcccctgctccaactgcagaggcttcattagtgaaaatgggattccctcagcaccacgtc
tctggtcttccatctactgatggtgtcaccaagcagccacctcagcaagtggcccttacg
atgtgtatgtgtcatttggactccaaagaggaagatgatgctgctgctgcttcaaggact
tcaagtggtggttacttttgccctcagtgctgcagtaaatactgtgaactccctgtagaa
tgcaaagcgtgtggattggcacttgtgtcagctccacacttggcacgttcctatcatcat
ttatttccagtggcccctttcacagagctaccattgactccagattctggtattgtgtct
tgccactcctgcctctaccgtttcactcaacttgataaaatgggatatcgctgtgagaca
tgctttcaaacattctgccttgagtgtgatttgttcattcatgacacaatgcatgtctgt
cctggctgtgccagtaacaggcagacttacggattagctgggagtgcaagcagtcaggtg
gccactgggtcttcttctggggtattgcctgtcttgggaatgagcaagctaagctcagga
ataagaagtacccattga
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