KEGG   Isorropodon fossajaponicum endosymbiont: CVFO_0929
Entry
CVFO_0929         CDS       T07680                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
ifo  Isorropodon fossajaponicum endosymbiont
Brite
KEGG Orthology (KO) [BR:ifo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ifo03400]
    CVFO_0929 (helD)
Enzymes [BR:ifo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CVFO_0929 (helD)
DNA repair and recombination proteins [BR:ifo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CVFO_0929 (helD)
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_12 AAA_30 zf-C4_Topoisom ResIII AAA_11 DEAD
Other DBs
NCBI-ProteinID: BBB24087
UniProt: A0A7R6PD23
LinkDB
Position
846490..849720
AA seq 1076 aa
MAETKHLIPGLFWRLLGFKGGSIDISEKGITLHKSDKSYFIDNHAFVKKGFITGGWPSFL
VFNTTQGEIKFGPLSHAKATQAYEWLQSYWYKEIFPEINKTFKSLQRRLTSRYIRSSQWP
EIISDAQSALNRFVKPPNEGLVDDKIRHPFIKINIYAHMERDKLDDYRKEYLTRKKKQFK
KYFKNIESHPLTEDQIEACIIDEDNNLVLAGAGTGKTSTMVGRAGFLLESKQAKPEDILM
LAFTKEASKEMQERMQQRINRDDVSISTFHKLGINILSEVEGGQPNISKYAEDNKSKNSV
FKQDVSKWIDELLEQDSYKDKVIKYFEDYLYVEKSPFDFKTQGEYFTYIEADEIRTFKGV
KVKGHGERIVANFLLRMGIEYEYEAKYKFDTKTIEYRQYKPDFYLPEHDVYIEHLGVDRD
ESTAPYIDKDLYHQGIRWKRNIHKINKTNLIETFYYEHKDGTLRSNLTKKLNDLGIECNP
LPNDAIIETLREHEEITKFSDLMAEIIKRYKANWFDQDKLNSKINASPYKKHLNIALELM
MPLMNRYEKILRDNDEIDFEDMIGKALEYVLDGSFKPQWKFIMVDEFQDISDPRARLVQA
LKEKSVDCSLFCVGDDWQAIYRFSGSDISFTTGFSEYFGATQFTKLKKTFRFNNSIAEVS
SQFVLKNPFQTKKSITTLSKVKKPAISILRESNKVVAGDDKELNLLLRRLAKQPDNNNSP
YLLGRYMQVDKVLQAINKLDRKVSVLILGRYKYTIPSPAEMKLHKEKFPNLELNKHTVHA
SKGKEADYVIVMRLQSGKDGFPSEKTNNPLLDALLPTPEDFEFAEERRLFYVAITRAKKR
SYLIADMSTSSSFVNELINEDYDIELNEFEIAQEQRIFQKFHCIKCETGVMQHKVRRKDN
ATFYGCSHWSLCKHTENECSHCGGAMTRVNESNKYRVCLPCKNWVLVCPDCGDDMKCISG
KYGLFWRGLRSHSDDKTTCQYTVNNNKVIPPKGYPNIEQLMGKKFSSRKDAKQYAEKVTT
ESKKTTHLVENEFDFEVFSNWDDASEYAQEKPGKRSIERLDERLDKGRGFTVKEKK
NT seq 3231 nt   +upstreamnt  +downstreamnt
atggcggagacaaaacatcttatacctggactattctggagactccttggattcaaaggt
ggttctattgatattagtgaaaaagggataacattacacaaaagtgataaaagctacttt
attgataaccatgcctttgtaaagaaaggatttattacaggaggatggcctagttttctt
gtattcaacaccacccaaggtgaaattaagtttggccccctatcccacgctaaagccaca
caggcatacgaatggctacaaagctattggtataaagaaatcttccctgaaataaataaa
acattcaagagcttacagcgaagacttacgagtcgatatattagaagttcccagtggcct
gagattataagtgatgcacaatctgcattaaatagatttgtaaagccacctaacgaaggt
ttggtggatgacaagataagacatccttttatcaagataaacatctatgcccatatggaa
agagacaaattggatgattatcgaaaagaatatctaactcgaaagaagaaacaatttaag
aagtattttaagaatatcgaatctcacccattaaccgaagaccaaatcgaagcctgcatc
atagatgaagacaacaacctagtattggctggagctggtacaggtaagaccagcaccatg
gttggtagagctggatttctgttggaaagtaaacaagctaaacctgaagatatactaatg
cttgcatttaccaaagaagcatccaaagaaatgcaagaaagaatgcagcaaaggataaat
agagatgatgtaagtattagcacctttcataaactaggcataaatatcctctctgaagtt
gaaggtggtcagcctaatattagtaaatatgctgaagacaacaaatctaaaaatagcgta
ttcaaacaagatgttagcaagtggattgacgagctattagaacaagacagttataaagat
aaagttattaagtattttgaagattacttatatgtagaaaagagtccgttcgattttaaa
actcaaggtgagtactttacttatatcgaggctgatgaaatacgaacctttaaaggtgta
aaagtaaaaggccatggtgagcgaattgtagcaaattttcttctcaggatgggcattgag
tacgagtatgaagccaaatataaatttgatacaaaaacaatagagtacagacaatataaa
cctgatttttatctacctgaacatgatgtttatattgaacatttaggagtagatagagac
gaatcgactgctccctacattgacaaagatttataccatcagggaatacggtggaagcgt
aatattcataaaatcaataaaaccaatctaatcgagacattctattatgagcataaagac
ggaacattaagaagcaacctaaccaaaaagcttaatgacttaggtattgagtgtaatcca
ttgccaaacgatgcaattatcgaaaccttacgtgaacatgaggaaataaccaagttctcc
gatttaatggctgagattattaagagatataaagccaactggtttgatcaagacaagtta
aacagcaagataaacgcttctccgtataagaaacatttaaatattgcattagagttaatg
atgccattgatgaataggtatgaaaaaatactaagggataacgacgagatagacttcgaa
gatatgattggtaaagctttggagtatgtattggatggtagttttaagccacaatggaaa
ttcattatggttgatgagttccaagatatatcagatcctagagctagactagtacaagca
ttaaaagagaaatcagttgactgctctttgttctgtgttggggatgattggcaggctatt
tacaggtttagtgggagtgatattagttttacaacaggattctcagaatactttggagca
acacaatttaccaagcttaaaaagactttcaggtttaataatagcattgcagaagtgtct
tcacaatttgttctaaagaatccttttcaaaccaagaaatcaataaccaccctcagcaag
gttaaaaaaccagctatttctatacttagagaaagtaataaagttgttgctggagatgac
aaggaactaaatttactgttaaggaggcttgccaaacaaccagataacaacaattctcct
tatttattaggcagatatatgcaggtagacaaagtcctgcaagctattaataaattagac
cgaaaagtttctgtattaatcttagggagatataaatatacaatacctagccctgcagaa
atgaaactgcataaggaaaagtttcctaatttagaattgaataaacacacagtccatgct
tcaaaaggtaaagaggcagattacgttattgttatgagattacagtctggaaaagatggc
tttccttcggaaaaaacaaataatccactactagacgccctactaccaacccctgaagat
tttgaatttgcagaggaaagaagattgttttatgtggcaattacaagagctaaaaagcgt
tcttatttaatagctgatatgtctacctcttcaagctttgtaaatgaacttatcaatgag
gattacgacattgagttgaatgagtttgaaatcgcccaagaacaacgaatctttcaaaag
tttcattgtatcaaatgtgaaactggagttatgcaacacaaagtcaggcgtaaagataat
gccaccttctatggctgttctcactggtccctttgtaagcacacagaaaatgaatgcagt
cactgtggaggtgcaatgacaagggttaatgaatctaataaatatagagtttgtttgcct
tgtaagaattgggtgttagtttgccctgattgcggtgacgatatgaagtgcatttctggt
aaatacggcctattctggagaggtttgcgttcacatagtgacgacaaaactacatgtcaa
tatacagtcaacaataataaagttattccgccaaaaggatatccaaatattgagcaatta
atgggtaaaaagtttagtagtcgcaaagatgctaaacaatatgcagaaaaagttacaaca
gaatccaaaaaaacaacgcatctagtagagaatgagtttgactttgaggttttttctaac
tgggatgatgcaagtgagtacgctcaagagaagcctggtaagaggagtattgaaagacta
gatgaaagactagataaaggaagaggatttaccgttaaagagaaaaagtag

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