Ictalurus furcatus (blue catfish): 128599091
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Entry
128599091 CDS
T09387
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03022
Basal transcription factors
ifu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128599091 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
128599091 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128599091 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128599091 (gtf2h2)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128599091 (gtf2h2)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128599091 (gtf2h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
DZR
Motif
Other DBs
NCBI-GeneID:
128599091
NCBI-ProteinID:
XP_053466455
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All DBs
Position
22:2347969..2353355
Genome browser
AA seq
393 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILFEAKRKRVFESHGQVRLGMMRH
LYVVIDSSRTMEDQDLKPNRLTSTLKLMEYFVDEYFDQNPISQIGIITTKNKRAEILTDL
AGNPKKHIVALKKAVDSGCVGEPSLYNALSIAMQTLKHMPGHTSREILVIFSSLTTCDPA
NIYELIQTLKSLKIRVSVIGLSAEVRVCTVLTRETGGSYNVILDESHFKDLLTFHVKPPP
ASSSSECSLIRMGFPQHVIASASDQDSKPSFSMSHLESSDAGPELSLGGYFCPQCRAKYT
ELPVECKVCGLTLVSAPHLARSFHHLFPLEAFQERPLEERTGDGFCQACQAELKDKSVFT
CPVCASVFCVECDVFIHDTLHCCPCCIQRQSAS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggaaccggagagagcaaagcgctgggaaggaggttatgaacgaacatgggag
gtgctgaaggaggacgagtccgggtccctgaaagccaccgtagaggaaattctcttcgag
gccaaacggaagagagtgttcgagagtcatgggcaggttcggctgggaatgatgcgtcac
ctgtacgtggtgatcgactcgtctcggacgatggaggaccaggacctgaagcccaacaga
ctcacgtccacgctgaagctcatggaatactttgtcgacgagtactttgaccagaacccc
atcagtcagatcggaatcatcaccaccaagaacaaacgagccgagattctcactgacctg
gcaggaaaccctaagaagcacatagtggcgctgaagaaagccgtggactcggggtgtgtg
ggcgagccgtctctgtacaacgccctcagcatcgccatgcagacgctcaaacacatgcca
ggacacaccagccgagagattctggtcatcttcagcagtctgaccacctgcgatccagcc
aacatctacgaactcatccagacgctgaaatcgcttaaaatccgagtgtctgtgatcgga
ctgtctgctgaggttcgggtgtgtaccgttctcaccagagaaacaggaggaagctacaat
gtgatcctggacgagagccacttcaaggacctgctgacgttccacgtgaagcctcctcct
gccagctcctcctccgagtgctcgctcatccgcatgggcttccctcagcatgtcatcgct
tctgcatctgatcaggactccaagccttccttcagcatgtcgcacttggagagctcagac
gcaggaccagaactcagtctcggtggttatttttgtcctcagtgcagagccaaatacacc
gagctgcccgtcgagtgtaaagtgtgtggtctgacgctggtctccgcccctcacctggct
cgctccttccaccacctctttcccctggaagcgtttcaggagcgtccgctggaggagcgc
acaggcgacgggttctgtcaagcctgccaagcagagctgaaggacaaaagtgtgttcacg
tgtccggtgtgcgcaagtgtgttctgcgtggagtgtgacgtgttcattcacgacacactg
cactgttgcccgtgctgtatacagaggcagagcgcgtcctga
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integrated database retrieval system
