Ictalurus furcatus (blue catfish): 128602207
Help
Entry
128602207 CDS
T09387
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ifu04131
]
128602207
Membrane trafficking [BR:
ifu04131
]
Protein recycling
Others
Others
128602207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
ATLF
BNR_6
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
128602207
NCBI-ProteinID:
XP_053471838
LinkDB
All DBs
Position
26:10756789..11005064
Genome browser
AA seq
1247 aa
AA seq
DB search
MRRRNGFALVWHGLSCALFLLCIGMLVEADISCQFCQPVGKWRPRQLQLNMDAPVTATGE
VLGRGQVFNVEHDCATEPEAESLGFSRRRRNTRAQEPLVTARGIRKSSLTRNEAPDEPYT
HSARPGAILPPRKKQRARRMRRDAQGSRDDPKSRLQLTSSTFALSGDSAHNQAMVHWSGQ
NSSVILMLTKLYDFNLGSVTESSLWRSTDYGTTYKKLNEKVGVKTILSYLYVSPNNKRKI
MLLTDPEVENSLLISTDEGATYQKYRLGFYVLSLLFHPEQEDWILAYSHDQKLYSSVEFG
RRWQLVHERVAPNRFYWSKMGLDKEPGLIHLETTISETQALYITCKLQNCTEANKGKPFP
GYIDPNSLVVQDEYVFVQVSTGGRPIYYVSSRRDLFTPMKLPKYTLPKDLHVISTDENRV
VAAVQEWNQNDTYNLYVSESRGVYYTLALENVMSSMGPEGNVMIDLYEVAGIKGMFLANK
KLDDQVKTYITYNKGRDWRLLQAPSTDLQGNSISCILPYCSLHLQLHVSANPYTSGNIAS
KESAPGIIVASGSIGAELSSNNISIFITSDAGNTWRQIFDEEFSILYLDQGGALVAIRHT
PLPIRHLWLSFDEGRVWNKYSFTSSPLFVDGVLGDPGEETLIMTIFGHVSHRSEWQLVKI
DFRSIFNRRCTEADYQTWHLHNQGEPCLMGVKRIYRKLKPMAKCVMGKTHSVTVTSDPCE
CTESDFECDYGYERRTDGRCTPAFWFHPSSMSRSCITGHSFLNSTGYRKVVSNNCTGGVV
DLYMARRRPCPSQAPKGLHLVTSEGKLTATLGHNVTFLVFLEQGDGSRTSITVDFGDGHA
ITYSNVSSIEDGIKHIYKTVGIYRVTATAENSLGFETAVLFLHVTCQLEYIHLSAPFVAV
KNKEVNLTVVLWPSQVGTVTYIWWFGNNSEPIITLEGSVAFTFPREGINVVTVQVVAGST
IQQDRKTIAVHEYFRSHLLAFSSNLDEHNPDVAEWRLDVSRVIKNSMVHVTGVNPEHLLV
TVLPGLPTAAEFFLLPDKELTEGKADKIITHLDQLSELVLNALNQNQVQFTLRPGVQITV
YAAHLSAAPLVDTSENHSSSAMLMLLSVVVVGLAVFLIYKFKRKIPGLHLYAAMQNEKEQ
EMIRSPASPIESEPSSSSQRELPTSPESLDTEFNVNTIGVYRFTFQIYATAIFCCCCFYC
KQCDTIGTVIIHIWYRSSSRLLWNMIHHHFLVPLSSHYINPSLIIFL
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgcggagaaggaacggattcgctctggtttggcacgggctttcctgtgccctgtttttg
ctctgtatcgggatgctggtcgaggcggacataagttgccagttttgtcagccggtggga
aagtggcgcccgaggcagcttcagctcaacatggacgctccggttactgcaacaggcgaa
gttttaggacgcggacaggttttcaacgttgagcacgactgcgcaactgagcccgaggct
gaatctctgggtttctcaaggcgcagacggaatactcgcgcgcaagagccactggtgaca
gcgcgcggtatccggaagtccagtttaacccgcaacgaagcgccggacgaaccctacaca
cacagcgcgcgccctggtgcgatccttccaccgcgtaagaaacaacgcgcgcgcagaatg
cgcagggacgcacaaggatcccgggatgatcctaaatcccgactgcaactcaccagctcc
acgttcgccctgagcggagactcggctcacaaccaagccatggtgcactggtccggtcag
aacagcagcgtaattctcatgctgaccaagctgtatgacttcaaccttggcagtgtcact
gagagctccctgtggaggtcaactgactacggaaccacttacaagaagcttaatgagaaa
gtcggggtgaaaaccatacttagttacttgtatgtcagcccaaataacaagcgaaagatc
atgctgctgacagacccagaggtggagaacagtctgctgatcagcacggatgaaggcgcc
acatatcagaaataccgccttggcttctatgtactcagcctgcttttccatcccgagcag
gaagattggattcttgcctacagccatgatcagaagctttacagctcagttgagtttgga
cgacggtggcagctggttcatgaaagggttgcgccaaatcgattctactggtccaaaatg
ggtctggataaagaacctgggctgattcacttggagactaccatttcagagacacaggct
ctgtacatcacctgcaagctgcagaactgtacggaggccaacaagggcaaacctttcccc
ggctacatcgaccccaattctctggtggtgcaggacgagtatgtgtttgtgcaggtgtca
acaggcggtcggccaatctactatgtgtcatcaaggcgagacctgttcacaccaatgaag
cttcccaaatatacgcttccaaaggacttgcacgtgatcagtacagatgaaaaccgggtg
gtggcagcggttcaggagtggaatcagaatgacacctataacctctacgtctcagagtcc
agaggagtgtactacacactcgccttggagaacgtaatgagcagcatgggacctgagggc
aacgtcatgattgatctatatgaggtagcaggaattaaaggtatgtttttggccaacaag
aaattagatgaccaagtgaagacatacatcacgtacaataaaggcagagactggagactg
ctgcaggcaccctctactgatctacaagggaacagcatcagctgcatattgccatactgt
tccttgcatttgcaactccatgtgtcagcaaacccttatacatctggaaatattgccagc
aaagagtcagcaccaggaatcatagtggcatcaggttccataggtgcagagttgtctagc
aataacattagcatattcatcacatctgatgctggaaacacatggaggcagatatttgat
gaggaattcagcatcctatacctggaccaaggaggtgcacttgtagctatccgacacact
cctctccctatcagacacttatggttgagtttcgatgagggccgggtatggaataaatac
agctttacatcttcgccactgtttgtagatggagttttgggtgatccgggggaagagaca
cttattatgacaattttcgggcacgtcagtcatcggtccgaatggcagctggtgaagatt
gacttcaggtctatttttaacaggcgatgcactgaggcagactatcagacttggcacctc
cataaccagggtgagccttgccttatgggtgtgaagagaatctatcggaagctgaagcca
atggccaagtgtgttatgggtaagacccactccgtcaccgtgacttcagatccctgtgaa
tgcactgagtctgattttgaatgtgattatggctatgaacggagaacagatgggcgatgt
acaccagcattttggtttcatccctcttccatgtccaggagctgcattacaggccacagt
ttcctcaacagtactggctacagaaaggtggtgtctaataattgcacgggtggtgtggtg
gatttgtacatggcccgtaggcgcccatgccccagccaggcccctaaaggcctccatctg
gtcaccagcgaggggaaactcacagccacactgggccacaatgtcaccttcctcgttttc
ctagagcagggtgatggatcaaggacgagcatcacagtggacttcggcgacggccatgcc
atcacatactccaacgtgagctccatcgaggatgggatcaaacacatctacaaaactgtg
ggaatatacagagtgactgctacagctgagaacagcctggggtttgagacggcggttctt
ttcttacatgttacatgtcagctggagtatatccatctctctgcgccttttgtggcagtg
aaaaataaggaagtcaacctgacagtggttctatggccgagccaagtgggaactgtcacc
tacatctggtggtttgggaacaactcagagccaataatcacactggaggggagtgtggct
ttcactttccctcgggaaggaataaatgttgtcactgttcaggtggtagccgggagcact
attcagcaagacaggaaaaccatcgcagtccatgaatatttcaggtctcatcttttagcc
ttttcctccaatttggatgagcacaaccctgacgtggcagaatggaggctggatgttagc
agagtcatcaaaaactccatggtccacgtgactggagtgaatccagagcatctgttggtc
actgttttgccaggactgcccactgccgctgaattcttcctgctcccggataaagagcta
acagagggcaaagcggacaaaataataacacatttagaccagctctcagagttggttttg
aatgcgctgaaccagaaccaggttcagttcacattaagaccaggagttcagatcacagtc
tacgctgcacatttatctgcagctcccctagtggacaccagtgagaatcacagcagctca
gccatgctaatgcttctctcagtggtagtagtgggtttagcagtgttcctcatctataaa
ttcaaaaggaagatcccaggcctccacctctatgcagcgatgcagaacgaaaaagagcaa
gaaatgatccggagcccagcgagcccgatagagagcgagccgagcagcagctctcagaga
gagcttcccacctcgccggagtctctggacacagagttcaacgtcaataccattggtgtg
tacaggttcacgtttcaaatatatgccactgcaatattttgttgttgttgcttttattgt
aaacagtgtgacacaattgggacagtcataattcacatttggtatagatcatcatcaaga
ctcctttggaatatgatccaccaccacttcctggtaccactttcatcacattacatcaac
ccatcattgattattttcctataa
DBGET
integrated database retrieval system
