Ictalurus furcatus (blue catfish): 128606671
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Entry
128606671 CDS
T09387
Symbol
nlrc5
Name
(RefSeq) NLR family, CARD domain containing 5 isoform X1
KO
K22615
NLR family CARD domain containing 5
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ifu04054
]
128606671 (nlrc5)
Pattern recognition receptors [BR:
ifu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128606671 (nlrc5)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
AAA_30
nSTAND3
AAA_25
AAA_16
TsaE
AAA_7
ABC_tran
AAA_22
LRR_4
Motif
Other DBs
NCBI-GeneID:
128606671
NCBI-ProteinID:
XP_053478968
LinkDB
All DBs
Position
4:12123313..12155400
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AA seq
1753 aa
AA seq
DB search
MKMEEMDLEEDVLDVVDQEASTIVDILCEQRDNVLQQIFPLVDARTREQLQHLPNNRESI
SGLVDYFRTSDQHTCRHFLDTIWSFCENIPLELDIRIVNLAGSSAGAFVNNPHVPDTENS
PQPRYGKRARLDQVQSYTNAVKSFLQKKFEKVTKDIKKKVCLNNTWLCWRTQKYARVRDR
PTKSQEGEEVSLEHKESVEALLMKTGRVVMLSGQAGSGKTLLMHCLAHHWAQGSYPSIEL
LFLLEFRQLNLISQPLSLKELLFRFFLPSDEDDEQSEAVLNYVLSNPEKICFIFDGYDEF
GARFKDPKELECSVNPYQQLPLADLLSALCSAKILPGCTVLVTCRPRDVFDLFGSSDYLV
AELLGFNQQRVKEYTQEYFQEKGREIKERAVSLLMDSHHLLSMSHVPGLCHVCCVCLDHF
LTSDMSQQPGTQLPTSLTQIYLHILSAFISRCHGCGSSDNHTPLLQRYRVQIAMLSKLAM
DGLENSRIVFPANELTTELMNFGANAGILSRLDLTCGDGSRRLGCAFTHLTMQEFMAALH
LMTNPDITESQLKKKLNLKSRWTAKTDPKTVFTDSLHLYMCGLAAEACTLNLVLLEGSEN
ARAIVLKRQDAVLKTLQRFVVSGRQTGPKIIELCRCAHETQNIDLARAIGSRDRFELRNI
RLNPVDIDALAFVISSANQMVCLDFGACCIEPECLNIIPNCKNLEELNFRSRKYDDKFAD
ALSGILPKLQSLKQLHFISGGLTNIGAAKLFKALECCPQITHLNVSDNYLTDESVKKITE
MFPKLAKLTSVILGKNNISINGIFILAGKMAAFPNIKEVYANAKKKEINVQFSANTTNSA
STDDLNNTEESKQLILNDWNLKWTNVHNLCPMLRGCSSLTVLNLSHNTLGNRGLKKLLEH
LPTLDTIQEINVSDNGVDMDGVVLLSTLLCTLKDLTEVEASHNGKKKLVLTFSSSRSDAL
KQLTSEGCDIPHKKLSLTHSDIHPTDMNKLCKNLIKCPNPLNLDLSHGILKDESTEKLLR
FLPNMASLNLLNLSHIQMSTDSALLLVQLLSDCQRTTTVELRQLGETFIKFLQAKSEAAT
CKFNQYRLSSANLAKLCEILEHCHHLTDLDLSSNFLKDEDVKTFVQFLPKLQISGSVSLN
NNNLTEVGVLYLLSLMHTCERVAAVEVSLGKEEQQALIRFVQKNSTGKMFSLRHCCFESS
HLQSLVNILTSCPKLTLELSSCTVQSQNLLFLLNKLATLNSVQTLELRNNSFNADTIKYL
VTEFCGDCNHRTIRIMEPWIKGEAAVGLVQCCLELNPNIKEIRVEKTCLKLSVESLVSAT
IPNEWENGNCSLSAVHSISFDDCDVEGQHLSSLQSTLKNCPSLQELHFSQLTMGADGAEF
LSSVLPSLKNLKILSLSSKGETEDEAVIFALQHAQKHLEQLSLAHHVIKDRGAAVLGNAL
QGFTRMRSLSLLKCLDCTATGGRDLVRGLVQCRSLEEIRLDSLELDEESVDCFAQGLQAM
TSLKKISLNKTISKEGSGVLCLLASLHTLIELEEIELIGLRMGDRGIEELVKYIPKWTRL
RKINLSENRVSDHAGEMLVKALSHCRALQQIHLFRNNLGHRSAAVLGQVLPSLSELSELD
LSENQMESKGCSSVCEALVSMKALKKLHLTSIGTSDLVNVASCLKHCTSIEDISLSWNNC
ENDVVLKLAEVLPQCSKLKRLDLEANNINTSGAMALATCLQFCPWIEVIRLWRNPIKKDD
LILKDKRLNFSST
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggaggagatggacctggaggaggatgttttggatgtggtggaccaggaggct
agcacaatagtggacattttgtgtgagcagagagataatgttctacagcagatctttccc
ttggtggatgctcggactcgagagcagttacagcacctaccaaataacagggagtctatc
tcaggtcttgtagattacttcagaacatcagaccaacacacatgccgccattttctggac
actatttggtctttctgtgagaatattcccttagagctggacatacgtattgtaaatctt
gcaggatcttcagctggagcattcgtaaacaaccctcatgtgccagatactgaaaactcc
cctcagccacgttatggaaaacgtgcacgtctagaccaggtgcagagttacacaaatgct
gttaagagttttctgcagaagaaatttgagaaggtgacaaaagatataaagaaaaaggtt
tgtctaaacaatacatggctgtgctggaggacacaaaaatatgcacgggtgagagacaga
ccaacaaagtctcaggaaggggaagaggtttcactagagcataaagagtcggttgaggct
ctgttgatgaaaacaggcagagtggtaatgctatcaggtcaggctggctctggtaaaacc
ttgttgatgcattgcctggcccaccactgggctcagggctcttacccctctatcgagcta
ctcttcctgctggagtttcgccagctcaaccttatttcacagccattgtctcttaaggag
ttgttgtttcgtttctttcttccctctgatgaagacgatgagcaaagtgaagcagtgctc
aattatgttctctccaaccctgagaaaatttgctttatatttgatggatatgatgagttt
ggggcaagatttaaagacccaaaggagcttgaatgctctgtaaatccttaccagcagctg
ccattggctgatctcctctctgcactatgcagcgccaagatcctgcccgggtgcacagtg
ctggtcacttgtaggccacgggatgtttttgacctatttggaagttctgattatttagtt
gcagagctgcttgggttcaatcaacaacgtgtgaaggaatacactcaggagtacttccaa
gaaaagggacgtgaaattaaagaaagagcggttagcttgctgatggacagccatcacctg
ctgtccatgtcccatgttccaggattatgtcatgtttgctgtgtctgcttggatcatttc
ctcaccagtgatatgtctcagcaacctggcactcagctaccaacatccttgacccaaatc
tacctccacatcctctctgcttttattagtcgatgccatggttgtggatcctctgataat
cataccccattacttcagagatatagggttcaaattgctatgttgagtaagcttgctatg
gatggcctggagaacagccgtatcgtattcccggcaaatgaactgactacagagctaatg
aactttggtgccaatgctggaattctgtcccgtttggatctcacttgtggagatggatcg
cgacgtctgggctgtgcctttacgcacctaaccatgcaagagtttatggctgctttgcat
cttatgacgaaccccgacatcacagagtcacagctcaagaagaaacttaacctgaaaagc
cgatggactgctaagactgatccaaaaactgtgttcacagactcccttcacctgtatatg
tgtggactcgctgcagaagcttgcactttaaatcttgtcctgctggaaggcagtgagaat
gcaagagctattgttctgaagcgacaagatgctgtacttaagactttgcagcgctttgtg
gttagtggccgtcaaacaggtcccaagattattgagctctgccgttgtgcccatgaaaca
caaaacattgatttggccagggctattggttcaagagatcggtttgagctgcggaatata
agactcaaccctgtggacattgacgccttggcatttgtaatttcatctgcaaatcagatg
gtatgtctggactttggcgcctgttgcatcgagccagagtgtttgaacatcattcccaac
tgcaagaacctggaagagctcaattttcgtagccgtaagtatgatgacaagtttgcagat
gctttgtctggtatcctgcccaaacttcagagcctgaagcagttacactttattagtggt
ggcctcactaatattggagctgcaaaacttttcaaggctttggagtgctgcccacaaatc
acacacctcaatgtcagtgataactacctaacagatgaaagcgtaaaaaagatcaccgag
atgtttcccaagctggctaaactcacatctgtcatcttggggaagaacaacatttccata
aatggaatatttatactagctggaaaaatggcagcctttccaaacattaaggaagtctat
gcaaatgcaaaaaaaaaggaaatcaatgttcagttctctgcaaacaccacaaacagtgcg
agcacagatgacctaaacaacactgaagaatcaaagcagctaatcttgaacgactggaat
ctcaaatggacaaatgtgcacaatctgtgccctatgctcagaggctgctcctctctcact
gtcctaaatttgtcccacaacacactggggaacagaggtctaaagaagttgctcgaacat
ctgcctactcttgacaccattcaagaaatcaatgtcagtgacaacggagtggatatggat
ggggtggtgcttctctcaactcttctctgtactctcaaagacctgactgaagtagaagct
agccacaacggaaagaagaaactggtcttgacgtttagctctagcagaagtgatgcatta
aagcagttaacctcagaggggtgtgatattccgcacaagaaactcagcttaactcatagt
gatatacaccccactgacatgaacaagctgtgtaagaatctgatcaagtgcccaaatcct
ctaaacctggatttgtctcatggaatattaaaggatgagtctactgaaaagctactaagg
tttcttccaaacatggcatctctcaatctactaaatttaagtcacatccagatgtcaaca
gatagtgctttgttattggtccaattgctttctgattgccagcgcactacaactgtggaa
ctcagacaactgggagaaacgtttattaagtttctccaagccaaatcagaagctgcaaca
tgcaagtttaaccaatataggctgagcagtgccaatctggcaaagctctgtgagatactg
gagcactgccatcatctgactgatctggatttgtccagtaacttccttaaagatgaggat
gtgaagacctttgttcaatttctgcccaagcttcagatctcaggttcagtgagcctcaac
aataacaatctaaccgaagtaggagtactctacctgctgagcctaatgcacacatgtgaa
agggtggctgccgtggaagtgagtcttggaaaggaggagcagcaggctctgattcgcttt
gttcagaagaattctacaggcaaaatgttcagtctgaggcattgttgttttgagtcaagc
catttgcaaagtcttgtgaatatacttaccagttgtcccaaacttacactagagttatca
tcatgcactgtgcaaagtcaaaatctgctgtttctactgaacaagctggctacactgaac
tcagtgcaaactctagagctaagaaacaattctttcaatgctgacacgattaagtatttg
gttactgagttctgtggggattgtaatcacagaacaattcggataatggagccatggatt
aaaggggaagctgctgttggccttgtgcagtgctgcctggaactgaatccaaacataaag
gagatcagagttgaaaaaacatgtcttaaactttctgttgaaagcctcgtctctgccaca
atccctaatgaatgggagaatgggaattgttccctttctgctgtgcactctataagtttt
gatgactgtgacgttgaggggcagcacttatcctcactacagtctactctcaagaattgt
ccctctctgcaggaattacatttctctcagctgacgatgggtgcagatggtgcagagttt
ctctcttcagttcttccctcgctgaagaatctcaagatcctcagtcttagttccaaagga
gaaacagaagatgaagcagtaatatttgcattacagcatgcacaaaagcacctggaacag
ctgagcttggcccatcatgtaattaaagacagaggagctgcagtattagggaatgccctt
cagggtttcacaagaatgcgatcactcagtctcttaaagtgcttggattgcactgcaaca
ggagggcgtgatttggtccgtggtctggtccagtgccgctctctggaagaaattcggctg
gactctttagaattggatgaagaaagcgtagattgctttgcacaaggccttcaggccatg
acatcactcaaaaagatcagtttgaataagacgatctcaaaggagggcagtggggttctg
tgtctgctggctagtctgcacacattaattgagctagaagaaatagaattgatcggattg
agaatgggtgatcgagggattgaggagcttgtgaaatacatccctaaatggaccagacta
agaaaaataaatctgtcagagaaccgtgtgagtgaccatgctggagagatgttggtgaaa
gcgctgtcccactgcagagcactgcaacaaatacatcttttcaggaacaaccttggtcac
agatctgcagctgtactgggtcaggttcttccatccctctctgagctctctgaattggat
ctatctgagaaccaaatggaatcaaaaggttgttcaagtgtctgtgaggctctggtcagc
atgaaggcactaaaaaaactacacttaacctccattggaacctcagacttggtcaatgtt
gcatcttgcctcaaacactgcacctctatagaggacatcagcttgtcatggaataactgt
gaaaatgatgtggttctgaaactggctgaagttctgccacaatgcagtaaactgaaaaga
cttgatctggaggccaataatatcaacacatcgggagccatggcccttgctacatgtttg
cagttttgtccttggattgaagtgatcagactttggaggaatcccattaaaaaggatgac
ctgattttgaaagacaagaggctgaatttctcatcgacctaa
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integrated database retrieval system
