Ictalurus furcatus (blue catfish): 128610473
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Entry
128610473 CDS
T09387
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128610473
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128610473
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-RING_6
U-box
CobU
Motif
Other DBs
NCBI-GeneID:
128610473
NCBI-ProteinID:
XP_053485785
LinkDB
All DBs
Position
7:31382465..31387512
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AA seq
549 aa
AA seq
DB search
MAETNILGLQDQFSCPICLDLLKDPVTILCGHTFCMVCINGCWDQEDQKGVYSCPQCKET
FTPRPVVSKNTVLAELMEKLMIEHQARRPTQCSTVTEECDFCTGRKSKAIKSCLVCLASF
CETHLQPHYESPAFKKHKLVEASRRLQEQICSQHDKLLEVYCHTDQQCICMLCMLDTHKG
HDTVSGAEASAEKKKQLLKTQRKCQQRILDREKEHQELSEAVEFYERSAQKAVQESERIF
TELIRSIERRRCEVTELIRAQEKAAVSRAEEVMKQLEQEIAELKRRDSELEVLSHTDPIH
FLQSFPSLLDIPGSADVHSIELSPFLSLEDVTAFVSQLRDKVEKFCYQEFRMVSNAVKEI
QIIPLPEPKSREEFLQYSCQFTLDPDTVNKHLCLSERNTVVTCSETAQSYSVHPDRFDYY
LQVLCTESVCGRCYWEVEWSGHHGVSIAVSYKNISRKGKGTECLFGRNDQSWRLFCYPSC
YSFKHIKKEIKIPVMPSSSRIGVYVDHRAGTLSFYSVSDTMKLLHRVHTMFTQPLYPGFV
VCKGSAIKL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacgaatattttaggacttcaggatcagttcagctgtccaatctgtctggat
ctactcaaggatccagtgactattctctgtggacacactttctgtatggtgtgtattaat
ggctgctgggatcaggaggatcagaagggagtctatagctgtcctcagtgtaaagaaacc
ttcactccaagacctgttgtgagtaaaaacactgttctggctgaactaatggagaaacta
atgatagaacaccaagctagacgtcctactcagtgttccactgtaactgaagagtgtgat
ttctgcactgggagaaaatccaaagccatcaagtcctgtctggtgtgtctggcctctttc
tgtgaaactcacctccagcctcactatgaatctcctgcctttaagaagcacaagctggtg
gaagcctccagacgactccaggagcagatctgctctcagcatgacaaactgctggaggtt
tactgtcacactgatcagcagtgtatctgcatgttgtgtatgttagatacacataaagga
catgatacagtatcaggtgcagaagcaagcgctgagaaaaagaagcagctgttgaagaca
cagagaaaatgtcagcagagaatcttggatagagagaaggagcatcaggagctatcagaa
gctgtggagttttatgagcgctctgcacaaaaagcagttcaggaaagtgagaggatcttt
acggagctgatcagatccatcgagagaagacgttgtgaggtgacagagctgatcagagct
caggagaaagctgcagtgagtcgagctgaagaagtcatgaagcagctggagcaggagatt
gcagagctgaagaggagagactctgagctggaggtgctttcacacacggatcccatccat
ttcctccagagtttcccctctcttttggacattcctggatctgcagacgtacactccatc
gagctcagtcctttcctctctcttgaggatgtaacagcgtttgtgtctcaactgagggac
aaagtggaaaagttctgctatcaggagttcagaatggtatcaaatgcagtaaaagaaatc
cagattattcctcttcctgaacccaaaagcagagaagagttcctacagtattcctgccag
ttcacactggacccggacacggtaaataaacacctctgtctgtctgagaggaacacagtg
gtgacctgcagtgaaacagcacaatcctattctgttcatccagacagatttgactattat
ctccaggtgttgtgtacagagagtgtgtgtggacgctgttactgggaggttgaatggagc
ggacatcatggcgtttctatagcagtgtcgtataaaaacatcagcaggaaaggaaaaggt
actgaatgtttgtttggccgaaacgatcagtcctggagattgttttgctatccctcctgc
tactcgttcaaacacattaaaaaagaaattaaaatcccagtaatgcccagctcctctaga
ataggagtgtatgtggatcacagggcaggaactctgtccttctacagcgtctcggacacg
atgaagctcctccacagagttcacaccatgttcactcagcctctttaccccgggtttgtg
gtttgtaaaggatcagctattaaactgtaa
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