Ictalurus furcatus (blue catfish): 128612410
Help
Entry
128612410 CDS
T09387
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ifu03036
]
128612410 (msh4)
Chromosome and associated proteins [BR:
ifu03036
]
Eukaryotic type
Meiosis-specific proteins
Others
128612410 (msh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_14
AAA_22
AAA_23
ATPase_2
AAA_29
Motif
Other DBs
NCBI-GeneID:
128612410
NCBI-ProteinID:
XP_053488530
LinkDB
All DBs
Position
9:14805054..14820136
Genome browser
AA seq
884 aa
AA seq
DB search
MPPVYPHGCTEQVKFIFNISGLVQSLLLLLSPIYKLVYSGLNRVNSSSSSWTGGGVYSSL
CRSSSTPRLRRTPGSTTRTLLGPAPQRELNMTSSSSASVCHAASVIVAVVEGRGLARGEI
GMASINTRSPELVLSQFADTGTYAKVITKLHILLPFEILMPDTASEKGQGTKLYNLIMEN
FPSVAFSAIQRKYFNERKGLEYIQQLCAPEFNTVLMDVQTKYYCLAAAAALLKYFEFIQN
SVYAPRSLKVSFTGSEQTAMIDAVSAKNLELVINNRGNRSEHTLLEVLNYTKTPGGERRL
RSNILEPLLDVDTINTRLDTVQELLHGEELFFGLKSAITQFLDIDQLLSALVQLPKQETV
EVAEAKIMHVIQLKHTLELIEPLKMVLKDAKTALLKAYYTSLEDSRFDSILDEIKTVINS
DTSYMKGSLNMRTQKCYAVRPNVNELLDIARRAYTEVVDDIAGLVDQLGEKYGLPLRTSF
NSARGFFIQMRLEGFGLPDGQLPGEFIKVTRQKNNYSFTTLDLMKMNDRCDEALKEIFHM
SYIVVRRLLNEVYKQIHCLYKLSDAVSMLDMLLSLANVCTISDYVRPEFTDTLAIRQGRH
PILERVAGQQPIPNNSHISEGSNFIIITGPNMSGKSTYLRQVALCQIMAQIGSFVPATFA
SFRVADQIFTRIGVDDDFETNSSTFMVEMKEVSYIIHNASNRSLIIIDELGRGTGAEEGI
GICHSVCEFLISLKAFTLFATHFLELCQLETLYPNVENQHMQVQHMRGTENSTESVVYTY
LLTQGFSEESNYGIRAAENTSFPLSIIQEAKSISAKVSQKLWAKHHSDPTTLRQGAVFRL
ATRLLQTARNSRLDPDSLRLYLKGLKRSYEAELKDSLETMDTEE
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgccacccgtgtatcctcacggctgtactgagcaagtaaaattcatatttaacatatca
ggcttggtgcagagcctactgcttttactttctcctatatataaacttgtgtattcaggt
ttgaacagagtgaactcgtccagctcttcatggactggtggtggggtctacagctcgctt
tgcagaagctcgagcactcctcgcctcaggagaacgccaggctcaactacacgcaccctg
ctgggaccagctccacagcgggagctcaacatgacgtcttcctcgtctgcatctgtgtgt
cacgctgcatctgtaatcgtggctgtggtggagggccggggtttggccaggggagagatc
ggcatggccagcatcaacacaaggtcccctgagttggtactttcacagtttgcagatact
gggacttatgccaaggtaattaccaaactgcatatcttactgccttttgagattctgatg
ccagacactgctagtgagaaagggcaaggaaccaagctctacaacctcatcatggagaac
tttccgtctgtagctttcagtgccattcagaggaagtactttaacgagaggaaaggtctg
gagtacatccagcagctctgtgcgcccgagttcaacactgttcttatggatgtacaaacc
aagtactattgtctggcagctgcagcagctctccttaagtactttgagttcattcagaac
tctgtctatgctcccagatctctgaaagtgagcttcactggcagtgagcagactgcaatg
attgacgcagtctcagccaagaacttggagctagtaattaacaacaggggcaacaggagt
gaacacactctacttgaggtcttaaactacaccaaaacacctgggggtgaaaggcggctt
cgctctaacattctggagcctctgttagatgttgacaccattaacacacgcctggacacc
gtacaggaactgctgcacggtgaggaactcttctttggtctcaagagtgcaattacacaa
ttcttggatatagatcagctgctttctgctcttgtacagctccccaagcaagagacggtt
gaagtggctgaagcaaagataatgcatgtcattcagttgaaacacacgctagaactgatt
gaaccactcaagatggtgttgaaggacgctaagacagccttactgaaagcttattacact
tcactagaagatagcaggtttgacagcattttggatgaaatcaaaacagtgatcaacagt
gacaccagctatatgaagggcagtctgaatatgcgaacacaaaagtgctatgctgtacgc
cctaatgtcaatgaattgctagacattgcacgtcgagcctacactgaggttgtggatgat
atagcaggattagtagatcagctaggagagaagtatggccttccactgcgcactagtttt
aacagcgctcgaggtttcttcatccagatgaggctggagggttttggcctgcctgatgga
cagctcccaggagagttcatcaaagtaactagacaaaaaaacaactacagcttcacgacg
ttagacctgatgaagatgaacgatcgttgtgatgaagccttgaaggagatatttcacatg
tcttatatcgtggtacgcaggttacttaatgaggtgtataaacaaattcactgcttgtat
aagctgtctgatgctgtgtccatgctggatatgctgctctccctcgccaatgtttgcact
atttcagactatgtgcgccctgaattcaccgatacactggcaataagacaaggccgccat
ccaatcctggaacgcgttgctggccagcagcccatccccaataacagccatatctctgag
ggaagcaactttattataatcacaggcccgaacatgagtggcaagtccacttatctcaga
caggtggccctctgccaaatcatggctcagataggatcatttgtgcctgctacatttgcc
tcgttccgtgttgctgatcagatattcactcggataggagtagacgacgattttgagacc
aactcgtcaacatttatggttgagatgaaggaggtgtcctacataatacacaatgcaagt
aacaggtcactcattattattgatgagctgggacgtggtactggtgctgaggagggcatc
ggaatttgtcactcggtttgcgagttcctcatcagtctgaaggcattcactctgtttgcc
acccacttcctggaactgtgtcagttggagactctttaccccaatgtagagaatcagcac
atgcaggtccagcacatgcgtgggactgaaaacagcacagagagtgtggtctacacctac
cttctgactcaaggcttctctgaggaaagcaactacggtataagagcagcagagaacaca
tcgtttccactgtccatcatccaggaggccaagtctatatcagccaaagttagccaaaag
ttatgggctaagcatcatagtgacccaaccaccctgcggcaaggggcagtgtttcgactc
gccaccagattgttacagactgcccgaaactccaggttggatccagacagcctccgtctt
tacctaaagggtctaaaaagaagttatgaagctgagttaaaggacagcttagagaccatg
gacacagaggagtga
DBGET
integrated database retrieval system
