Ictalurus furcatus (blue catfish): 128613865
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Entry
128613865 CDS
T09387
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ifu01002
]
128613865 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128613865 (usp47)
Enzymes [BR:
ifu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128613865 (usp47)
Peptidases and inhibitors [BR:
ifu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128613865 (usp47)
Ubiquitin system [BR:
ifu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128613865 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
128613865
NCBI-ProteinID:
XP_053490976
LinkDB
All DBs
Position
10:complement(25080304..25113925)
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AA seq
1353 aa
AA seq
DB search
MEMVPSEENQLVPKEGMFWSCRQSILEEMKKRFSQIENAAEEPRVLCIVQDTTNAKTVNE
RLTLNLPASTTLLKLYEDVAHKAGYVNGTFELAWANVVDLAPLDQASEMSLVESGFEPGK
RNFLQLMDKDGEQPQIASDESGTADSSGLDDSSQDRFIGPLSRDGTVGCSSDYSSPSYSY
SSILNKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYNWEFEESEEGPVTSIPYQL
QRLFVLLQTSKKRSIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADL
INQLYQGKLKDYVRCLECGNESWRIDTYLDIPLVIRPFGASQAFGSVEEALQAFIQPETL
DGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELD
MSPFIDLEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSTDDGVDEGICLDSTSAAERVL
KPKSSLTYELFSVMVHSGSAAGGHYYACIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGS
SGSRGYYSSAFASSTNAYMLIYRLKDSSRNAKYLDAEDFPEHIKRLVQRERESEEQEKRQ
REIERNTCKIKLFCMHPVKMMMMMENKLEVHKDKTLREATEIAYKLMELEGVVPLDCCRL
VKYDEFHEYLERSYEGEEDMPMGLLLGGVKSSYMFDLLLETRRPDQVFQPYKPGEVMVKV
HVVDLKSETIGAPVSVRAYLNQTITEFKQLIAQATGLPAETMRVVLERCYNDLRLLYVPN
KTLKAEGFFRSNKVFVESSDSEEHQATFTDSLLWKLLDRHGNTIRLFVSLPEQSPGSIAH
RTSCPKVSADSEDSFEGGKSSGHCVEAILEESTEKLKNLSLQQQKQKPSSSTSESQKSSD
HSDFEHLDFPQPENQLASEERSDSDANNDRSTSSVDSDILSSSHSSDTLCNADGTPLPLA
NGLDSHSITSSRRSKAHEGKKETWDTAEEDSGTDSEYDENGKSKTQTHYLYFRAEPYSQE
GAAGDGQKGLLVHVDKRITLASFKQNLEPFVGVPSTQFKVFRVYANNQEFESVRLNETLS
SFSDDNKITIRFGRALKKGEYRVKVYQLLVNESEPCRFLLDTVFAKGMTVRQSKEELLPQ
LRDQCKLDLSIDRFRLRKKTWKNPGTVFLEYHVYEEDINISSNWEVFLEVLDEPERMKSM
SQLAVLTRRWFPAQMKLEPFREVVLESSSVDELKEKLSEMSEIPLENLEFAKGRGTFPCD
ISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVVFYRDSTEELMELSEEERNELMKKESSR
LLKTGHRVSYSPRKEKALKIYLDGGPSKDPGQD
NT seq
4062 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcccagcgaggaaaaccagctcgtacccaaagagggtatgttttggagt
tgcaggcagagtattttggaggagatgaagaagaggttctcgcagatcgagaacgctgcc
gaggaaccccgagtgctgtgtatcgtccaggacaccaccaacgccaagaccgtcaacgag
agactgacgctcaacctcccggcttccaccaccctcctgaagctctacgaagacgtcgct
cacaaagccggctacgtgaatggcacctttgagctggcatgggccaacgtggtggatttg
gctcctctggaccaggccagtgagatgtctctggtggagtctgggttcgagccggggaag
aggaacttccttcaactcatggacaaggatggcgagcagcctcagatagcttctgatgag
tccggcacggcggacagcagcgggctggatgacagttctcaggaccgcttcatcggtccc
ttgtcccgtgatggtacagtgggctgtagcagtgactacagcagccccagctactcctat
tcctccattctcaacaagtctgagacaggatatgtgggtttggtcaaccaggccatgact
tgctacctgaacagtttactgcagacgctgttcatgacgccagagtttagaaatgctctc
tacaattgggagtttgaggagtccgaggaaggtcctgtcactagcatcccctaccagctg
cagaggctgtttgtgctgttgcagaccagcaagaaacgatccatagagaccacagacgtg
acgcgcagcttcggctgggacagcagtgaagcctggcaacagcacgacgtccaggagctt
tgtcgggtcatgttcgacgccttggagcagaagtggaaacagacagagcaggctgacctt
ataaatcagctgtaccagggaaaactgaaggactatgtgcgctgtctggagtgtggcaac
gaaagctggaggatcgatacatacctggacatcccattggtcatcaggcctttcggagcc
agccaggcctttggcagcgtggaggaagcactgcaggccttcatccagcctgaaactttg
gacgggcccaaccagtatttctgcgaacgctgcaagaagaaatgcgatgcacgcaagggt
ctgcggtttctgcactttccctacctgctgacgttgcagctgaaacgttttgactttgac
tacaccactatgcaccgaatcaagctcaacgaccgtatgaccttccccgaggagctcgac
atgagcccctttattgacctcgaggacgagaaatcccctcagacggagagctgcactgac
agtggggcggagaacgaaggcagttgccacagcgaccagatgagcaacgacttctccaca
gatgatggtgttgacgagggcatctgcctggacagtaccagtgccgccgagagggtgctt
aagccaaagagctcactgacctatgaactgttctcggtaatggtgcattctgggagtgcc
gcaggtggacactactacgcctgcatcaagtccttcagcgatggccagtggtacagcttc
aacgaccagcacgtcagcaagatcacacaggatgacatcagaaagacgtacggtggttcc
tcagggagcagaggctattactccagtgcctttgccagctccacaaacgcatacatgctc
atatatagactgaaagattcctcaaggaatgcaaagtacctcgacgctgaagacttccca
gagcacataaagcgtctcgttcagagggagcgagagtccgaggagcaggagaaaagacaa
cgagagatcgagcgcaacacctgcaaaatcaagctgttctgcatgcatcctgtcaagatg
atgatgatgatggagaacaagctggaggttcacaaggacaaaacactccgagaggccaca
gaaatagcgtacaagctgatggagcttgagggcgtagttcctctggactgctgtcgcttg
gtgaagtatgatgaatttcatgaatatctggagcgctcatatgagggggaggaggacatg
cccatggggctgctccttggcggggttaaatcctcctacatgttcgatttgctactagag
acccgccgacccgaccaagtgttccagccttataaacctggagaggtgatggtgaaggtc
cacgtggtggatctgaagagcgagaccatcggagctcccgtcagcgtcagggcatacctg
aaccaaaccattacggagttcaagcaactcatcgcacaagccaccgggcttcccgcagaa
accatgcgagtcgtcctggagcgttgctataacgacctccggcttctctacgtgcccaac
aagacactgaaggctgagggtttcttcaggagtaacaaggttttcgtggagagctccgac
tctgaggaacaccaggcgacgttcaccgactctctcctgtggaagcttctggaccgtcac
ggcaacacaatcagactgtttgtttcgctcccggagcagtccccaggctccatagcccac
agaactagttgccccaaagtgagcgctgactctgaggactcgttcgaggggggtaaaagc
agcgggcattgcgtcgaggccatactggaagagagcacggagaagttaaagaacctttcc
ctccaacagcagaagcagaagccatcttccagcaccagcgagagccagaagagttcagac
cacagtgatttcgagcacctcgatttccctcagcccgagaaccagctggcttcggaggaa
cgctcagactctgacgccaacaacgaccgcagcactagctccgtggactcggacatcctg
agctcgagccatagcagtgacacgctgtgtaacgctgacggcacgcctctgcctctggcc
aacggcctcgactcgcacagcatcaccagcagccgccgatccaaagcccacgagggcaag
aaggagacgtgggacacggccgaggaggactcgggcacggacagcgaatacgacgagaac
ggcaagagtaaaacgcagacgcattacctgtacttcagagcagaaccgtattcacaggaa
ggtgctgccggggatggacagaaaggtttacttgtccatgttgataaaaggatcacactg
gcatcgttcaagcagaacctggagccgttcgtcggagtcccctctactcagttcaaggtc
ttccgggtctacgccaacaaccaggagtttgagagcgtgcgactcaacgagactctttct
tctttttcagatgacaacaagatcaccattcggttcggacgagccctaaagaaaggagaa
tacagggtaaaggtgtaccagctgttagtcaatgaatccgagccttgtagattcctgttg
gatacagtgttcgctaagggcatgacagtgaggcagtctaaagaggagctactgccccag
ctccgagaccagtgcaaactggaccttagcatagacaggtttcgactccggaagaagaca
tggaaaaacccaggcaccgtgtttctggagtatcacgtttatgaggaggacatcaatatc
tcgagtaactgggaagtcttccttgaagttcttgacgaaccggagcggatgaagtccatg
tctcagctggcggtgctgacacgacgctggtttccagctcagatgaagctggagcccttt
cgtgaggtggtgctagagagcagcagtgtggacgaactcaaggaaaagctcagtgaaatg
agtgagattcctctcgagaacctggagttcgccaagggacgaggaacatttccttgtgac
atatccgtgttggagatccatcaggacttagactggaatcctaaggtttccacactcaac
gtctggcccctgtacatctgcgacgatggtgcggtggtgttttacagagacagcactgag
gagctcatggagctctcagaagaagagcgcaacgaactgatgaagaaggagagcagccgg
ctgctgaagacgggccaccgggtcagttattctccccgcaaagagaaagctctcaagatc
tacttagacggagggccttctaaagacccgggccaggactga
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