Ictalurus furcatus (blue catfish): 128614508
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Entry
128614508 CDS
T09387
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ifu01002
]
128614508 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128614508 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ifu04147
]
128614508 (usp13)
Enzymes [BR:
ifu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128614508 (usp13)
Peptidases and inhibitors [BR:
ifu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128614508 (usp13)
Ubiquitin system [BR:
ifu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128614508 (usp13)
Exosome [BR:
ifu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128614508 (usp13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
128614508
NCBI-ProteinID:
XP_053491826
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All DBs
Position
11:complement(10441462..10470290)
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AA seq
859 aa
AA seq
DB search
MATDLGELLVPYMPTIRVPRSGDRVYKSECAFSYDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAVPRRRNGKVFLDLELNRDFNGDDFEYEDEAKL
VIFPDHYEIPLPNIEELPALVTIACDAILNAASAYKKQEQDSWEEELQVSKHARSLRQQE
NGVRIPPSGWKCAKCEMRENLWLNLTDGSVLCGKWFFDGSGGNGHALEHYKETKFPLAVK
LDTITPDGADVYSFDEEEAVLDPHIAEHLTHFGIDMLKMQRTENGHHTDNHVQPRATEWE
VIQESGLKLKAVYGSGYTGLRNLGNSCYLSTTMQVLFSIPEFQRAYVGNLQRIFDYSPLD
PTQDFSTQMAKLGHGLLSGQYSKPPIKSEFIEQVMKEEYKQQHRGISPRMFKALVSKGHP
EFSSNRQQDAQEFFLHFINLVERNSAGSENPSDVFRFIVEERVQCCQSQKVRYTQRVDYL
MQLPVPIEAATNREELIAYETKRKDAEKNLRAPPDPVRARIPFTACLQAFNEPENVLDFW
SSALQAKSAGVKTSRFTTFPEYMVVQLKKFTFGVDWVPKKLDVSVDMPDFMDLNRFRATG
LQAGEEELPDLTPPIVIPEDIRDSSVNNSLESPEIDEASVMQLAEMGFPLEACRKAVYYT
GNMGAEMAFNWIIAHMEEPDFAEPLAIPSYMEADLPSASFPTASPLDNQPPEESISILTS
MGFPRHHTIRALKATNNNLERALDWIFTHPESEEESEAMSDMVDTEPNDTSFSNANTHSD
STLSPEQEMSSPRVRDGPGRYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDHRVCLS
ESPPKDLGYIYFYRRLPSC
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggccacggatctgggcgagctgctggtgccgtacatgcccaccatacgggtgccgaga
tcaggagacagagtgtacaagagcgagtgcgccttttcctatgactctccggaatcagaa
ggtgggttgtatgtgtgtatgaacacattcctgggctttggaagagaacacgtggagaga
cattaccgtaaaactggacagagcgtgtacatgcacttaaaacgtcatgtgaaggagaaa
gccacaggtgctgctgggggtgccgtgccaagaagacggaatggaaaagtatttttagat
ttagaacttaaccgtgactttaacggggatgattttgaatatgaagacgaagccaagctt
gtcatattcccagaccactatgagatccctttaccaaatatcgaggagttgcctgccctg
gtgacaattgcttgtgatgctatacttaacgctgcttctgcatataaaaagcaagagcaa
gattcatgggaggaggagcttcaagtgtccaagcatgccagaagcctcagacaacaagag
aacggggttcggattcctcccagtggctggaagtgtgccaagtgtgaaatgcgagagaac
ctgtggctgaacctgacagatggctcggtcctctgtgggaaatggttcttcgatggaagc
ggcgggaacggacatgcccttgaacactacaaagaaaccaaattcccacttgcagtcaag
ctagacaccatcaccccagatggagcagatgtttactccttcgatgaagaagaggcagta
cttgaccctcacatagcagaacacttgacacacttcggaatagacatgctaaagatgcaa
aggacggagaatggtcaccacacagacaatcatgtgcagcctcgagccactgagtgggag
gtgattcaggaatcaggccttaagctgaaggcagtctatggttcagggtacacaggcctc
agaaacctgggcaacagctgctacctcagtaccactatgcaagtgctcttcagtatccct
gagttccagagagcgtatgtcggtaatctacagagaatatttgactactcaccccttgat
cctactcaagacttcagcacacaaatggcaaaactgggtcatggactactttcaggccag
tattccaaaccaccaatcaaatcagaattcattgaacaggtgatgaaagaagagtacaag
cagcagcacagagggatttcccccagaatgttcaaggctctggtcagcaaaggccaccca
gagttctcctcaaatagacagcaagatgcccaagaattctttttgcattttatcaacctg
gtagagaggaacagtgctggctcagagaaccccagcgatgtgttccgcttcatcgtggag
gagcgtgtacagtgctgccagtcacagaaagtgcgttacacacaaagagtggactacctt
atgcagcttcctgtgcccatagaggctgccaccaacagagaagagctcatagcatatgag
actaagcggaaggatgctgaaaaaaacttacgggctcctccagatccagtgagggcccgc
attcccttcactgcctgtctacaagcctttaatgaacctgagaatgttctggacttctgg
agttcggcactgcaggccaagtcggctggagtgaaaacttctcgttttacaactttccct
gaatacatggttgtacagctcaaaaaattcacatttggagtggactgggtcccaaaaaag
ttagatgtttctgtagacatgcctgactttatggacttgaatcggttccgggctacaggg
ctccaagcaggtgaagaagagctccctgaccttacgcctcctattgtcattcctgaggac
ataagagacagctcagtgaataattctttggaatctcctgaaatagatgaggcctctgtg
atgcagttggcagaaatgggcttccctctggaggcctgccggaaggctgtgtactacact
gggaacatgggagctgaaatggcatttaactggatcattgctcacatggaggagccagac
tttgctgagcctcttgcgattccttcatatatggaggcagacttgcccagtgccagcttt
cctactgccagtcctctggataaccagcctcctgaagaaagcatctcaatcctcacttcc
atgggcttccccagacatcacactattcgagcactgaaggccacgaataataacctggag
cgggctttagattggatctttactcacccagagagcgaggaggagagcgaggccatgtcc
gacatggtcgacacagagcccaatgataccagtttctcaaatgccaacacgcacagtgac
tccacgctgtccccggagcaggaaatgtctagtccacgtgttcgagacggccctggacgg
tatgaactctttgccttcataagtcacatgggaacatcaacaatgtctggtcattatgta
tgccatatcaaaaaggaaggaagatgggtcatttacaatgatcatagagtatgtttgtca
gaaagtcctccaaaagacttgggttacatttacttttaccggcgcctgcccagctgctag
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