Ictalurus furcatus (blue catfish): 128616175
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Entry
128616175 CDS
T09387
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03022
Basal transcription factors
ifu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128616175 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
128616175 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ifu03021
]
128616175 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
ifu03400
]
128616175 (gtf2h4)
Transcription machinery [BR:
ifu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128616175 (gtf2h4)
DNA repair and recombination proteins [BR:
ifu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128616175 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
128616175
NCBI-ProteinID:
XP_053494689
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All DBs
Position
12:22879196..22892572
Genome browser
AA seq
467 aa
AA seq
DB search
MKLRVQLQCKNLHEYLKELSPDILDRLYNHPATCLAVYRELPSLAKNYVMRMLFLDHPLP
QAAVALWVKIDSQKDHDQCVSVLTGLRLWHSQQLQGGLQGIVLNPVFKDNLRIALLGGGK
PWADEGNSLGPDRHARDVESLDRYAMERWEVILHFMVGSPSAAVSQDLAQLLTQAGLMKS
EAGEAPCITSAGFQFLLLDTASQLWYFTLQYLKTVQSRGMDLVEILSFLFQLSFSTLGRD
YSVEGMSESLLMFLQHLREFGLVFQRKRKSRRYYPTRLAISLAAGVTANPSSSSSSSTAL
NPSPGTGDSGFIVVETNYRVYAYTNSELQIALVALFSEMLYRFPNVVVAQVTRESVQQAI
ANGITAQQIIHFLRTRAHPVMLKQTPALPPTITDQIRLWELERDRLQFTEGVLYNQFLSQ
ADFEVLRDRAQGLGVLVWQNPQHRVMVVTPHGHSEVKRFWKRQKSHT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccgagtacaactgcagtgcaagaaccttcatgaatacctgaaggaactgagt
ccagacatcctggacagactgtacaaccacccagctacatgtctcgccgtttacagggag
ctcccgtctctggcgaagaactatgtgatgcgaatgctgttcctagatcatcctctcccg
caggcagccgtggcattgtgggttaaaatagacagccaaaaggatcatgaccagtgtgtg
tctgtgctgactggactgagactgtggcacagccagcagctgcagggaggccttcagggc
atcgtgctcaaccctgtgtttaaggataacctgaggattgcactgctcggaggtggtaag
ccgtgggcagacgagggcaacagtctcggccctgatcggcacgcgcgggacgtagagagc
ctggaccgttatgccatggagcgctgggaggttatcctgcacttcatggtgggctccccg
agcgccgcggtcagccaggacctcgctcagctcctcacccaggccggcctcatgaagagt
gaggccggtgaagcgccatgcatcacttcagctgggtttcagtttctgctactcgacacc
gcctctcagctgtggtacttcaccctgcagtacctcaaaacagtgcagtctagagggatg
gacctcgtggagattctttccttcctgttccagctgagtttctccaccctcggcagggac
tattctgtcgagggcatgagcgagtctctactgatgttcctgcagcacttacgagagttc
ggcctggttttccagagaaagaggaagtcgaggagatactaccccactagactcgccata
agtctggctgcaggagtcactgccaacccttcatcctcctcctcctcctctactgctttg
aatccttccccaggaacaggagactctggtttcattgtggtggaaaccaactatcgcgtg
tacgcttatacaaactcggagctgcagatcgctctggttgctctcttcagcgagatgctg
tatcggtttcctaacgtggttgtggcgcaggtcactagagaatctgtacagcaggctatt
gctaacggcatcacagcacaacagatcatccacttcctgaggaccagggcacatcctgtt
atgcttaaacagactccggcacttcctccgaccatcacagaccagatcagactgtgggag
cttgaaagagatcggctgcagtttacagaaggcgtattgtacaaccagttcctgtcacag
gctgattttgaggtgctgcgcgatagagctcagggtttgggagtgctggtgtggcagaac
ccacagcacagggtcatggtggtgaccccacatggacacagcgaggttaagaggttctgg
aagagacagaagagtcacacgtag
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