Ictalurus furcatus (blue catfish): 128616851
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Entry
128616851 CDS
T09387
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128616851
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128616851
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
DUF4407
SOAR
Serine_rich
Syntaxin-6_N
Motif
Other DBs
NCBI-GeneID:
128616851
NCBI-ProteinID:
XP_053495669
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Position
13:28456762..28467287
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AA seq
557 aa
AA seq
DB search
MEAEGNNTVGSSCLDQKECQNSTAGSTPFSNMKQKEEKIQKNAQEEPGEKSCPREDGPPC
EDDVLCDSCIESPRKAKKSCLTCLVSYCEDHLRPHLEKEKFQSHRLVKPLKDVEIRMCET
HNVPLELFCCVETSCVCEKCVSEQHHGHETLSITEARQKMEKELQEKQTELVKTVTAAEN
SINKLQSCILSVEACVCEVRSVLQQQVSALQAGVEEVRAELTKVLEAEMKNTLGQVGGAR
VCVVQRCDELKRAHTHLDKLSKNKNSVDFLQEYSQWRKTSSDVSLPEVCVTQTDRLQSFG
RIITHTTQELCDILLTAYRNSLKEFCTTDDNLHQPTVHPLSPVQQNITLPEPQSRDDFLK
YASPLTFDGDTVHQFLRVTEGGRKLTNTTPWQHSYPEHPERFQHWKQALSTQSFSSGRHY
FEMDLSGAGVHVGVTYVGILRQSNQNEACLTGSSVSWCVEWSGRGFSAWHGGVETPLSTP
KATRLGVCVDFRCGTVMFYSVRGEAEGGMELLHRFETELREPLYAAVFLPKKENVVVLVE
PGEELPLKSPLPPCSPP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagaaggaaacaatacagtgggttctagctgcctggatcagaaagagtgccag
aacagcactgcagggagtactccattttcaaacatgaagcagaaagaggagaagatccag
aaaaatgcccaggaagaaccaggagaaaagtcatgcccaagagaggatggacctccgtgt
gaggacgacgtactttgtgactcgtgtattgaaagtccacgcaaagccaagaagtcgtgc
ctgacatgtctggtttcctattgcgaggatcatctgaggccacatctagaaaaggagaag
tttcagagtcaccggctggtgaagccactgaaagatgtggaaatacgcatgtgtgagaca
cacaacgtcccgctggagttgttctgctgtgtcgaaacttcttgtgtgtgtgagaaatgt
gtgtccgagcaacaccatggacatgaaaccctgtccattacagaggcacgccagaaaatg
gagaaagagctccaggaaaagcagacagagctggtgaagacggtgacagcagctgagaat
tccattaacaaactacagagctgcattctctctgtagaggcgtgtgtgtgcgaggtgcga
tctgtgctccagcagcaggtgagcgctctgcaggcgggggtggaggaggtgagggcagag
ctcaccaaggtgttggaggcggagatgaaaaacacactggggcaggtgggcggagctcgt
gtgtgtgtggtgcagcgctgtgatgagctgaaaagagcacacacacacctggacaaactc
agcaagaacaagaacagcgtcgacttcctgcaggaatactcccaatggaggaagacgagc
tcggatgtgtctctgcctgaggtgtgtgtcactcagacggaccgtcttcagtctttcggc
cgcatcatcacacacaccacgcaggaactgtgtgacatactgctcactgcataccgcaac
tcactcaaagagttctgcacaactgatgataatctccatcagcccacagtgcatcccctc
agtcctgtacagcagaacatcacgctgcctgagccgcagagcagagacgacttcctcaaa
tatgcgtctccgttaacatttgatggtgacacggtgcaccagttcctgcgtgtgactgaa
ggcggcaggaagttgaccaacaccacgccctggcaacacagctaccctgagcatcccgag
cgcttccagcactggaagcaggcgctctccactcagagcttctcctcagggcgccattac
tttgagatggacttgagcggtgcaggggtccatgtcggcgtgacgtacgtggggatccta
cggcagagcaaccaaaatgaggcgtgcctcacaggcagcagtgtctcctggtgtgttgag
tggagtgggcgtggtttctcggcctggcacggcggcgtggaaacccccctgagcacccca
aaagccacgagactgggcgtgtgcgtggatttcaggtgtggcacggtgatgttttacagc
gtgagaggagaagcagaaggagggatggagcttctgcatcggttcgagacggagctgaga
gagccgctctacgctgctgtgttcctcccaaagaaggagaacgttgtggtgctggtggaa
ccaggagaggaacttccactcaagagccccttacctccatgttctccaccgtga
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