Ictalurus furcatus (blue catfish): 128618422
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Entry
128618422 CDS
T09387
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128618422
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128618422
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_10
DUF4407
EzrA
PPP1R32
Zn_ribbon_SprT
DUF1932
UPF0242
AMP-binding_C_2
Motif
Other DBs
NCBI-GeneID:
128618422
NCBI-ProteinID:
XP_053497985
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Position
2:complement(1252632..1255911)
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AA seq
560 aa
AA seq
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MAEANISVDQDQFICPVCLDLLKDPVAIPCGHSFCKVCINISWDQEDQEGVYSCPQCRDT
FTPRPVLRRNNMLAEVVEKLKKTEVQAASPAHCYAGPGDVECDFCTGRKHKAVKSCLVCL
ASFCEIHLKPHLEVSALKKHTLIEASAKLQEKICSQHDKIMEIYCRTDQTCICYLCMMNN
HKGHDTVTVTAERAEKQRELKEEQMKSQQRIQEKQKKVQELKQTVNTIKFQTQTAVEDSE
IIFTEMISSMEKRRSEVTELIRAQEKAELSRAERLLEQLEQEIADLQRRVTEMEELSHTH
DHVHFLQTFASGRQSPPLDRPEFQTSSITDLQHLSFDGVRNSLSDLKKRFKEFCKEEFNK
LLPHAAAVQQAISPSEPESREDFLKYFHYLTLDPNTAYRHLRLSENDRVVRYSERKMTFF
DHPESFECFAQVLSKESVCGRCYWEVEWSGDGVSISVSYKGIGRKGRGDECLFGRNNQSW
SLWCSSSSLSFYHNNIKTELRVPSSSRIGVYVDHSTGTLSFYSISDTMRLFHRVRTTFTQ
PLYTGFWVGIQSLVRLGDPK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccaacatttcagtagatcaggaccagttcatctgtccagtgtgtctggat
ctcctgaaggatccggtggcgatcccctgtggtcacagtttctgtaaggtgtgtattaat
atctcctgggatcaggaggatcaggagggcgtctacagctgtcctcagtgcagagacact
ttcactccgaggcctgttctacgcagaaacaacatgctggctgaagtggtggagaaactg
aagaagactgaagtccaagctgcttctcctgctcactgttacgctggacctggagatgtg
gagtgtgatttctgcaccgggagaaaacacaaagccgtcaagtcctgtctggtgtgtctg
gcttcattttgtgaaattcatctgaaacctcatctagaggtttctgctttgaaaaaacac
acattaatcgaagcctcagcaaaactacaagagaagatctgctctcaacatgataaaata
atggagatctactgtcgtaccgatcagacctgcatctgttacttgtgtatgatgaataat
cacaaaggacacgacaccgtcacagtcacagcagaaagagccgaaaaacagagagagtta
aaggaggagcagatgaaatcccagcagagaatccaggagaagcagaagaaggtgcaggag
ctgaaacagactgtgaacactataaagttccaaacacagacagcagtggaggacagtgag
ataatctttactgagatgatcagctccatggagaaaaggcgctcggaggtgacggagctg
atcagagctcaggagaaggctgaactgagtcgagctgaacgactcctggagcaactggag
caggagatcgctgatcttcagaggagagtcactgagatggaggagctttcacacacacac
gatcacgtccacttcctccagactttcgcttctggacgtcagtctcctccattagacaga
ccagagtttcagacatccagcatcactgaccttcaacatctctcatttgatggagtgagg
aattctctctcggacctgaagaagcgattcaaggaattctgtaaggaggaattcaacaaa
ctccttccacatgctgcagcggttcagcaggcgatttcaccatcagagccagaaagcaga
gaagattttctgaaatatttccattatctgactctggatccaaacacggcatatcgtcac
ctcagactgtctgagaacgacagagtggtgaggtacagcgagagaaagatgacgttcttt
gatcatccagaaagctttgaatgctttgctcaggtgttgagtaaggagagtgtgtgtgga
cgctgttactgggaggtggagtggagcggtgatggtgtgtccatatcggtctcatataaa
gggatcggaaggaaaggacggggtgacgagtgtctgtttggacgcaacaatcagtcctgg
agtctgtggtgttcttcttcttccctctctttctatcacaacaacattaagaccgagctc
agagttccatcatcctccagaataggagtgtatgtggatcacagtacaggaactctgtcc
ttctacagcatctctgacacgatgaggctcttccacagagtccgcaccacattcactcag
cctctatacaccgggttctgggtgggtattcaatcacttgtgaggttgggtgatccaaaa
taa
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