Ictalurus furcatus (blue catfish): 128618765
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Entry
128618765 CDS
T09387
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128618765
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128618765
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4_2
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_10
zf-RING_5
U-box
zf-Nse
Zn_ribbon_SprT
EzrA
LMBR1
DUF4407
IF-2B
Motif
Other DBs
NCBI-GeneID:
128618765
NCBI-ProteinID:
XP_053498504
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Position
2:complement(2261589..2265354)
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AA seq
594 aa
AA seq
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MYFRDDKTDSRFFLSPSLCLSLSHIVCECRKMTEASISVDQDQFSCPVCLDLLKDPVTIP
CGHSFCKVCINGFWDQEAQKGVYSCPQCRDTFTPRPVLHRNNMLAEVVEKLKKTEVQAAS
PAHCYSGLGDVECDFCTVRKRKAVKSCLMCLASFCETHLKPHYQSPAFKIHTLIEASAEL
REKICSEHDEVLKIYCRTDQICICSLCMLDKHKGHDAVLVAAGRSEKQSELKEEQMKSQQ
RIQEKQKKVQELKQTVNTIKLSAQTAVEDSEIIFTEMISSMEKRRSEVTELIRAQEKAEL
SRAERLLEQLEQEIADLQRRVTELEQLSHTHDHLHFLQALASGRRSPPLDRAEFQTSGIT
DRQHLSFDGVRNSLSDLKKRLEEFCEEEFNKLLPQDAAVQIISPSEPQTREDFLKCFCYL
TLDPNTAYRYLILSDKNRLLTAHGTEQKYSDRPERFSHFPQVLSKESVCGRCYWEVEWRS
HGHVAISVSYKDISRKGRGNKCEFGLNDQSWSLRCSSSSHSFYHNNIKTDLGVPSSSRIG
VYVDHSAGTLSFYSVSDTMKLLHRVHTTFTQPLYAGFRIYGGFYSVKVRLCDPI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcagagacgacaaaactgatagcagattctttctctctccctctctctgtctc
tctctctctcacatagtgtgtgagtgcaggaaaatgaccgaggccagtatttcagtagat
caggatcagttcagctgtccagtgtgtctggatctactgaaggatccggtgacgatcccc
tgtggtcacagtttctgtaaggtgtgtattaatggcttctgggatcaggaggctcagaag
ggtgtctacagctgtcctcagtgcagagacactttcactccgaggcctgttctacacaga
aacaacatgctggctgaagtggtggagaaactgaagaagactgaagtccaagctgcttct
cctgctcactgttactctggacttggagatgtggagtgtgatttctgcaccgtgagaaaa
cgcaaagccgtcaagtcctgtctgatgtgtctggcctccttttgtgaaactcatctgaaa
cctcactatcagtctcctgcatttaagatacacacgttaatcgaagcttctgcagaacta
cgggagaagatctgctctgaacatgatgaagtgctgaagatctactgccggaccgaccaa
atatgtatctgctctttgtgcatgttggataagcataaaggacacgatgctgtattagtt
gcagcaggaagatctgagaaacagagtgagttaaaggaggagcagatgaaatcccagcag
agaatccaggagaagcagaagaaggtgcaggagctgaaacagactgtgaacactataaag
ctcagtgcacagacagcagtggaggacagtgagataatctttactgagatgatcagctcc
atggagaaaaggcgctcggaggtgacggagctgatcagagctcaggagaaggctgaactg
agtcgagctgaacgactcctggagcaactggagcaggagatcgctgatcttcagaggaga
gtcactgagctggagcagctttcacacacacacgatcacctccacttcctccaggcttta
gcgtctggacgtcggtctcctccgttagacagagcagagtttcagacatccggcatcact
gaccgtcaacatctctcgtttgatggagtgaggaattctctctcggacctgaagaagaga
ctcgaggaattctgtgaggaggaattcaacaaactccttccacaggatgcagcagttcag
atcatttcaccatcagaaccacagaccagagaagactttctgaaatgtttctgttatctg
actctggatcccaacacagcatatcgctacctcattctgtctgataagaacagattgttg
acagcccatggaacagagcagaagtactctgatcgtccagaaagattttcgcactttcct
caggtgttgagtaaggagagcgtgtgtggacgctgttactgggaggtggagtggagaagt
cacggacatgtggccatatcggtctcatataaagacatcagcaggaaaggacggggtaac
aagtgcgagtttggactcaacgatcagtcctggagtctgcggtgttcttcttcttctcac
tctttctatcacaacaacattaagactgatctcggagttccatcgtcctccagaatagga
gtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctctgacacgatgaag
ctcctccacagagtccacaccacattcactcagcccttatacgctgggttccggatttat
gggggattttattctgtaaaagtaaggttgtgtgatccaatataa
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