Ictalurus furcatus (blue catfish): 128619183
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Entry
128619183 CDS
T09387
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128619183
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128619183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_6
zf-RING_5
Zn_ribbon_SprT
DUF4407
DUF496
Fib_alpha
DUF5446
Motif
Other DBs
NCBI-GeneID:
128619183
NCBI-ProteinID:
XP_053499151
LinkDB
All DBs
Position
2:2548071..2556837
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AA seq
569 aa
AA seq
DB search
MAEASISVDQDQFICPVCLDLLKDPVAIPCGHSFCKVCINDCWDQEDKSGVYRCPQCRDT
FTPRPVLRRNNMLAEVVEKLKKTEVQAASHAHCYAGPGDVECDFCTGRKHKAVKSCLICL
ASFCETHLKPHYEVLGLKKHKLVEASGNLQEKICSEHDKVLEIYCRTDQSFICFLCMMEE
HKSHDTVSVKAYRTEKQSELKEEQMKSQQRIQEKQKKVQELKQAVNTIKLSAQTAVEDSE
GIFTEMISSMEKRRSEVTERIRAQEKAELSRAERLLEQLEQEIADLQRRVTELEQLSHTH
DHLHFLQEIKVLVSGRRSPESIRSEFQSDLSEDSRSITVNQHLSFDGVRKSLSALKKRLE
EFCQEEFIRIPEHAAADQIILPSEPKSREDFLHYFCDLTLDPNTVNYYLILSERNRAVMG
SKRKQQYSDHPERFDYSYQVLSKESVCGRCYWEVEWRGAGVYMSVSYKDISRKGRGNQCV
FGGSDQSWSLWCSSSSLYFWHNNIRSDLRVPSSSRIGVYVDHSAGTLSFYSISDTMKLLH
RVHTTFTQPLYVGFLVLYKGSTVRLCDPK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccagtatttcagtagatcaggatcagttcatctgtccagtttgtctggat
ctattgaaggatccagtggcaatcccctgtggtcacagtttctgtaaggtgtgtattaat
gactgctgggatcaggaagataagagcggagtgtatcgctgtcctcagtgcagagacact
ttcactccaaggcctgttctacgcagaaacaacatgctggctgaagtggtggagaaactg
aagaagactgaagtccaagctgcttctcatgctcactgttacgctggacctggagatgtg
gagtgtgatttctgcaccgggagaaaacacaaagccgtcaagtcctgtctgatatgtctg
gcctccttttgtgaaactcatctgaaacctcactatgaagttcttggtttgaaaaagcac
aagttagtcgaagcttctggaaatctacaagagaagatctgctctgagcatgataaagtg
ctggagatctactgtcgtactgaccaaagcttcatctgttttctgtgtatgatggaagaa
cacaaaagccacgacaccgtctcagttaaagcgtacagaactgaaaaacagagtgagtta
aaggaggagcagatgaaatcccagcagagaatccaggagaagcagaagaaggtgcaggag
ctgaaacaggctgtgaacactataaagctcagtgcacagacagcggtggaggacagtgag
gggatctttactgagatgatcagctccatggagaaaaggcgctcggaggtgacggagcgg
atcagagctcaggagaaggctgaactgagtcgagctgaacgactcctggagcaactggag
caggagatcgctgatcttcagaggagagtcactgagctggagcagctttcacacacacac
gatcacctccacttcctccaggaaataaaggttttagtctccggccgtcgctcgcccgaa
tctattagatcagagtttcagtctgatctcagtgaggactcacgcagcatcactgtcaat
caacatctctcatttgatggagtgaggaaatctctctctgctctgaaaaagagactcgag
gaattctgccaggaggaattcatcagaatccctgaacacgctgcagcagatcagatcatt
ttaccctcagaaccaaagagcagagaagattttctgcactatttctgtgatctgactctg
gatcccaacacagtaaattattacctcattctgtctgagaggaacagagcggtgatgggc
agtaagagaaagcagcaatactctgatcatccagagagatttgactactcctatcaggtg
ttgagtaaggagagtgtgtgtggacgctgttactgggaggtggagtggaggggtgctggt
gtgtacatgtcagtttcatataaagatatcagcaggaaaggacggggtaatcagtgtgtg
tttggaggtagtgaccagtcctggagtctgtggtgttcttcttcttctctctatttctgg
cacaacaatattaggagtgatctccgagttccatcatcctccagaataggagtgtatgtg
gatcacagtgcaggaactctgtccttctacagcatctctgacacgatgaagctcctccac
agagtccacaccacattcactcagcctctatacgttggattcctagtgctttataaagga
tcaactgtgagattatgcgatccaaaataa
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