Ictalurus furcatus (blue catfish): 128620336
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Entry
128620336 CDS
T09387
Symbol
pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121
KO
K14316
nuclear pore complex protein Nup121
Organism
ifu
Ictalurus furcatus (blue catfish)
Pathway
ifu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128620336 (pom121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ifu03019
]
128620336 (pom121)
Messenger RNA biogenesis [BR:
ifu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128620336 (pom121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
128620336
NCBI-ProteinID:
XP_053501216
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All DBs
Position
16:9704297..9728346
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AA seq
1249 aa
AA seq
DB search
MSPADKRRLAFISLLVIALFFLLLICIPTYLYILFFFVVTGAVCYYKAEEFQLFERLGLN
PRRGLTVPTALWRWLPGRTLTGVPAGGRNKTLTNKNDVRNSLVSPSDRSCVGSVYKRNAT
FSDSVFSPRNILMGSYLAKAESPSGTWRPAGSSGSGGNPREQLRERLVRPNHGVPPPNRR
LSFGNSDPVGSAGKFTITPQRHYPLQQVGTSPVGLFPPAQWDNFHKKNVLTQRNTPIHSP
VTVKIARPENTTRLAFFDQLNSTGAVASPEFEARADPCSRETVLSVLRASRKRDVDNDDD
DDDERAHEAGQKSKRRRNDSSGSSQSVFEPLLANGAPSQLVPKPGSLKRGLNVSVLEESM
VKRSRTSSISSVSGCPVSFGVPGSARNPIRSSYSSSQGYPQRRLASNLSSSPLVSPGSSQ
SQTPERVAKKPRAEDATSPHSDSAINSDKTATETAPGSGKYAPMPDPPVTSRSDSGGSGG
KRKRKIQLVSMCRGEQISLPPPPELGYTITVKDLDMEKKATLNQIQKVLEEPEPEKPSCA
PCSSAPAAPSVGMFSQIVSFSSASAAPVGSATSLASLSTPAAGVPPASTAISTPASAPAI
DLTVTPSSTVSATPIQTVVLPTLATSTTLAAPVANSLLESLKSMKSSSLLSVPSPIAATS
AAPATSVAAQAPSSITSTSLTFGAVKSEPSFATPQPTVSTPPSSVTSAFAQILAQPLPSS
STTLTLGGGSLFGFTSSVPTSCAPTAPTVSAQPASSTANPNPSGFKPIFGPAVTTTASTA
EVKPTQTTFKPVFGGAFNQPASSTSSVPATQSSTFLFGVVTKTQPVSSSVPSSVPNTQNP
SQSLFGDQTNSHSVAASVSTSSTQNLTPALFGGLTNSQTMAASVSSSSNIQNSTPSLFGG
LPNSQPMTASVLSSSSNTQNPVPSLFGGLASSQPMAVSISSSSSSTQNSIPSLFGSFAAP
KSTFQFGGSSSTATTSGISTSTTTTNSNNTALQFGALKPAPTAPPAAPQNTFTFGQSPAT
TSFTGFGTANNTTPMTTNTPATQATFGSPVFSTSTCFANPQAPTPVKPFTFGASVGGGTA
VTPLAFGTPASTAAPTFGNSTQSAFTGASTGFPFGNTSALPVSAASMPSATFTFGAAPAT
PQNSATSGGFNFAAALSGAQFATPTQAGQNQGFSFGAGNTDNKPTFGTSTPAFGTASGPL
PFGSPGTPAGGFSASPFGPPSATFSIGAGSKPSGSRQRLQARRQHARKK
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctgcagataaacggcgactagcttttatctctctactcgttattgccctgttt
ttccttttgttgatttgtataccgacatatctgtatatacttttcttttttgtcgtaact
ggtgccgtttgttattataaagcagaggagtttcagcttttcgagaggttgggcctgaat
ccccgccgtgggctgacagttcctaccgcgctgtggcgctggttgccgggcaggactttg
actggcgtcccggcaggcgggcggaacaagactctaactaataaaaacgatgttagaaat
tctttagtgtctcccagcgataggagttgtgtcggttctgtttataagcgaaacgcaacg
ttcagcgactcagtattcagtcctcggaacatcctgatggggagttacctcgctaaggca
gaaagtccctccggcacatggcggcccgctggaagctcaggctctggcggcaaccccaga
gaacaactccgggagagacttgtccgacctaatcatggagtcccgccgccaaacagaaga
ttgtcttttggcaacagtgatccggtgggttctgcagggaagttcaccatcacccctcag
agacattacccactgcagcaggtaggaacctctccggtgggcttatttcccccagctcag
tgggacaacttccacaagaagaacgttctcacgcagcgcaacacacccatacacagtcct
gttacagtgaagatcgcaagaccggaaaacacaacacgcttagcattttttgatcagttg
aactccactggagcagtcgcatccccggagtttgaagcccgagctgacccgtgttctagg
gagactgtactgagcgtgctcagagcaagccgtaaacgtgacgttgataacgacgatgat
gatgacgacgagagagcccatgaagctgggcaaaagagcaaaaggaggcggaatgacagc
agtggaagttcccagtcagttttcgagccactgctagctaatggtgctccatcccagctt
gtaccaaaacctggaagtttgaagagaggcttgaacgtctccgtgttggaggagtccatg
gtaaagagatctcggacctcttcgattagctcagttagtggatgtcctgtttcctttggc
gtgcccggatcagcccgcaaccctattcgtagctcttacagttcctcacagggttaccct
cagaggagattagcatctaatctgagttcatctcctcttgtgagccctggatcatcacag
tctcagactcctgagagggtggccaaaaagccgagggcagaagatgccacttcaccacat
tctgattcagctattaactccgataagacagccactgaaactgcccctggttctggtaaa
tatgcccctatgcctgatccccctgttacatcacggtcagactctggaggaagcggtggc
aaacgtaaacgtaaaatccaactggtgtccatgtgcagaggcgagcagatatctttgccc
ccaccccctgaactgggctatacaatcactgtgaaggacctggatatggagaaaaaagct
actcttaaccaaatccagaaagtccttgaggagcctgagccagagaagccaagctgtgcc
ccttgttcatctgctcctgctgctccctccgttggcatgttttcccagatagtttcattt
tcctcagcttcagctgcccctgtagggagtgctacttcactggcctccctgtctacccca
gctgctggtgttccacctgcctccactgcaatttctaccccagcttcagcaccagctatt
gacctcacagttactccatccagcacagtcagtgctacaccaatccagactgtggtgctg
cctacacttgccaccagcaccactttagcagcaccagtggctaattcactattggaatct
cttaagagcatgaagagcagctctctactcagtgttccctctcctatagctgctacctct
gcagctccagcaacgtctgtggcagcccaggctccctcttccattacctccacttcttta
acttttggggctgtaaaatctgagccctcctttgccactccacagcccacagtgtcaact
ccaccttcatcagtgacctctgcttttgcccagattctggctcagcctttaccatcctca
tccaccacactcacccttggaggaggcagcctctttggcttcacttcttctgtgcccaca
tcgtgtgcaccaactgctcctacagtctctgcacagcctgctagcagtacagccaatcca
aacccatcagggttcaagcctatttttgggccagccgtgacgacgacagcctccaccgca
gaggtcaaacctactcaaaccactttcaagcctgtttttggcggtgcatttaatcagccg
gcttcttcaacttcctctgtaccagcaactcagagtagcacgtttctatttggtgtagtc
actaaaactcagccagtgtcttcctcggtcccctcatcagtccccaatacacagaatccc
agtcaatctctgtttggtgatcagactaacagccattcagtggctgcttctgtctccacc
tctagtacccagaatcttactccagctctgtttggtggactgactaacagccagacaatg
gctgcttccgtttcatcctcctcaaatatccaaaattctactccgtctctatttggtgga
ctgcctaacagtcagccaatgactgcttcagttttgtcatcctcctccaatacccagaat
cctgttccatctctgtttggtggactggccagcagccaacctatggctgtttcaatctcg
tcatcctcctccagtacccagaattctattccatctctgtttggtagctttgctgctcca
aagagcacctttcagtttggaggttcgtcatctacagccaccacctctggaattagcact
agtaccacaactaccaacagcaacaatacagctttacagtttggtgctttaaaaccagca
ccaactgctcctcctgctgctcctcagaacacattcacctttggccaaagcccagccacc
acctcctttacagggtttggtacggccaacaatactacccccatgacaacaaacacccca
gcgacccaggccacgtttggtagcccagtattcagcacctccacatgctttgccaatcct
caagctcctactccagtcaagccttttacttttggtgccagtgttggaggaggtactgca
gtcacaccactcgcattcggcacacccgctagcacagctgcaccaacatttggaaattct
acacagtctgcatttactggagcctccactggttttccctttggtaacacaagtgctttg
ccagtgagtgctgcctctatgccatctgctaccttcacatttggagcagcaccagccaca
ccgcagaactctgcaacatctggaggttttaatttcgcagcagcactttccggagcacag
tttgcaacacctacgcaagcagggcagaatcaggggttctcgtttggagcaggcaacact
gataataagcctacttttggaacctccacccctgcatttggcactgcaagtgggcccctt
ccatttggcagccctgggacacctgcagggggattcagtgcttcaccctttggccctcct
tcagccactttttcaattggtgctggctcaaagcccagcggttcacgacaaagactacag
gctcgcaggcagcacgcaaggaagaagtaa
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