Ictalurus furcatus (blue catfish): 128621089
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Entry
128621089 CDS
T09387
Name
(RefSeq) tripartite motif-containing protein 65-like
KO
K12006
tripartite motif-containing protein 16
Organism
ifu
Ictalurus furcatus (blue catfish)
Brite
KEGG Orthology (KO) [BR:
ifu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ifu04121
]
128621089
Ubiquitin system [BR:
ifu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128621089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
SPRY
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
U-box
DUF4407
DUF1759
Motif
Other DBs
NCBI-GeneID:
128621089
NCBI-ProteinID:
XP_053502549
LinkDB
All DBs
Position
17:complement(21494358..21503941)
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AA seq
474 aa
AA seq
DB search
MAKASISVFQHQFSCPLCLNLLEDPVTIPCGRSFCKVCINGFWDQEDAKGVYSCPQCRET
FFSRSVLLRNSNLTKVVKELKKIELQAASPAHCYAGPGDVECDSCTGRKRKAVKSCLVCQ
ASYCLAHLKPHYQSPAFKKHKLVEACAKLQEKICSQHDKPIESYCYTDQSFICYLCSMYE
HKGHSIVNTTAERTEQQNEVKEEQMKSQQRIQEKQKKVQELKQTVDTIRSEQRLLIHTQE
LKQTVDTIKSFPSICVSPGSEDSPSFTVNQHLSFDGVYPQAIAVQTISPSESKSKEDFVQ
YFCYLTLDPNTAHRRLILSEKNRAVTHSEKEQQYSTHQARFHSYTQVLCKESVCGRCYWE
VEWSGGVSISVSYKEISRKGRGNECLFGYNSQSWSLRCSSSSVSFWHKNIKTDLQGPVSS
IIGVYVDHSAGTLSFYSVSDTMRLLHRIHTTFTQPLYAGFRIWYNSAVRLCDSK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggccagtatttcagtatttcagcatcagttcagttgtccattatgtcttaat
ctgctggaggaccctgtaactattccatgtggccgcagtttctgtaaggtgtgtattaat
ggcttctgggatcaggaggatgcgaagggcgtctacagctgtccccagtgtagagagact
ttcttttcaaggtctgttctactcaggaactccaatctgactaaagtggtgaaggaactg
aagaagattgaactccaagctgcttctcccgctcactgttacgctggacctggagatgtg
gagtgtgattcctgcaccgggagaaaacgcaaagcagtcaagtcctgtctggtgtgtcag
gcctcctactgtttagctcatcttaaacctcactatcagtctcctgcttttaagaagcac
aagttagttgaagcctgtgcaaagctccaagagaagatatgctctcagcatgacaaaccg
attgagagctactgttatactgaccaaagcttcatctgttatttgtgcagtatgtatgaa
cacaaaggccacagtatagttaatacgactgcagaaagaactgaacaacagaatgaggta
aaggaggagcagatgaaatcccagcagaggatccaggagaagcagaagaaggtgcaggag
ctgaaacagactgtggacactattagaagtgaacagagattactcatacacacacaggag
ctgaaacagacagtggacactattaagagtttcccatctatctgtgtttctcctggatct
gaggactcacccagcttcactgtcaatcaacatctctcatttgatggagtttacccacaa
gctatagcagttcagacaatttcaccctcagaatcaaagagcaaagaagattttgtgcag
tatttctgttatctgactctggatcccaacacagcacaccgtcgactcattctgtctgag
aagaacagagcggtgacacacagtgagaaagaacagcaatattctactcatcaagcgaga
tttcactcttacactcaggtgttgtgtaaggagagtgtgtgtggacgctgttactgggag
gtggagtggagcggtggtgtgtccatatcagtctcgtataaagagatcagcaggaaagga
cggggtaatgagtgtttgtttgggtacaacagtcagtcctggagtctgcgttgttcttct
tcctctgtctctttctggcacaagaacattaagactgatctccaaggtccagtgtcctcc
ataattggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtctctgac
acgatgaggctcctccacagaatccacaccacattcactcagcctctgtatgctgggttc
cggatatggtataactcagctgtgaggttatgtgactcaaagtga
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