Ignatzschineria rhizosphaerae: MMG00_03060
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Entry
MMG00_03060 CDS
T08009
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
ign
Ignatzschineria rhizosphaerae
Pathway
ign00071
Fatty acid degradation
ign00362
Benzoate degradation
ign00650
Butanoate metabolism
ign01100
Metabolic pathways
ign01120
Microbial metabolism in diverse environments
ign01200
Carbon metabolism
ign01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
ign00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
MMG00_03060
09103 Lipid metabolism
00071 Fatty acid degradation
MMG00_03060
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
MMG00_03060
Enzymes [BR:
ign01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
MMG00_03060
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
Pyr_redox_2
NAD_binding_2
TrkA_N
DAO
F420_oxidored
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
UNM96850
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All DBs
Position
703444..705561
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AA seq
705 aa
AA seq
DB search
MSHVHMSNVQYTLVNDIAFLTINDGKVNSLGFALRLALFSMLQAAIEDDQVTKIVIEGNG
KFFSAGADIYEFNTPNATKSPLLPELITLIRESPKLIVAAVNGIAFGGGFELALAAHLRV
GFSSTQFRLPEVSLGLIPGAGGTQLLPRVISIGKGIGKAAEIIVKASVVDGSEALKLGII
SELYETLDRQQLYQFVKAQEGIQRIDEAPVTLDYADEQIIADLKKWIEKRKRGYDAQNVA
LKSVLNSHEMPLQEGIASERAAFLALLSGKQFAALRHLFASEKGLYPRLVPDQFKEIRCA
AVIGGGLMGRGICMSLANAGIATTIIEQNPEALAKALHGIKETYDKMLQRGRIKSVDRDQ
ALSLIQGNVDYQTIIDADIVIEAVYEDMDLKKSIFKQLDGICAKETIFVSNTSRLDINEL
GAVTKRESLFLGMHFFSPAHLMKLVEVVKGDKTSQYALNSVIELSKRMNKLGVVVGVCEG
FVGNRMLTTYRNEALFVLEEGASVSQVDHALYHFGMAMGPFTMTDMAGLDISWAARKRLQ
EKGAKSSFRDSVIGDRLCEIGRFGQKTGAGYYRYEKGSYAPIADPIVEMVIEACAKEKDI
HRRVWSDAEIVERTIFALINEGFKILEEGIVAHSSAIDLVYIHGYGFPAYRGGPMFYADT
IGLPKVLEKMNYFAKHFGKHWQPSALLVDLVAKGLSVTDYQKKDE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgttcatatgagtaatgtgcaatataccttagtgaatgatattgccttttta
acgattaatgatgggaaggtcaatagcttagggtttgcattaagattggcgcttttttca
atgctgcaagcggcgatagaggatgatcaagtaacaaagattgtcattgaagggaatggg
aagttttttagtgctggggctgatatttatgaatttaataccccaaatgcgacaaaatct
cccttattaccagaacttatcaccttaataagagagagccccaagctaattgtagctgcg
gttaatggcattgcttttggcggtggttttgaattggcactagctgcccatttgcgtgtg
ggattttcatcgacccaatttcgtctaccagaggtaagtttaggccttattcctggcgct
ggtggtacgcaattattaccaagagtcattagtataggaaaaggtatcggaaaagcggct
gaaataattgtgaaagcctctgttgtagatggctctgaagctttaaaacttggcattatc
agtgagctttatgagactttagatcggcagcagctatatcaatttgtgaaagcgcaagaa
ggtattcagcgtatagatgaagcgccagtgacacttgattatgctgatgagcagattatt
gctgatttaaaaaaatggattgagaagcgaaaacgaggttatgatgcgcaaaatgtggct
ttaaaatcagtattaaatagccatgaaatgcctttgcaagagggcattgccagtgaaagg
gctgcttttttagcgctattatcagggaagcaatttgccgctttaaggcatctttttgcc
agtgaaaagggattatatcctcgattagttcctgatcagtttaaagagattcgatgtgca
gctgttattggtggtggattgatgggaagaggaatttgcatgagtttagcgaatgcaggg
attgccacaacgatcattgagcaaaatcctgaagctttagcaaaggcgcttcatggtatt
aaagagacttatgacaagatgctgcaaagagggcgtattaaatcggtagatagagatcaa
gcgctctccttaattcaaggtaatgttgattatcaaacgattattgatgccgatattgtt
attgaagcggtctatgaagatatggatcttaaaaagtccatctttaagcaacttgatggg
atttgcgctaaggaaacgatttttgttagtaatacctctcgtttagatattaatgaatta
ggggcggttacgaagcgagaatccttatttttgggaatgcacttttttagcccagcgcat
cttatgaagcttgtggaagtcgtaaaaggcgataagacctctcaatatgccttaaatagt
gtgattgagcttagtaaacgcatgaataagcttggggttgttgtgggtgtgtgtgaagga
tttgtcggaaataggatgttaacaacctaccgcaatgaagctttgtttgttttagaagag
ggtgcaagcgtttcacaggtggatcacgcgctttaccattttggtatggcgatgggacct
ttcaccatgacggatatggcaggcttagatattagctgggcggcgcgtaagagattacaa
gaaaaaggggcgaaaagttcttttagagattcagtcattggtgataggctctgtgaaata
gggcgctttgggcaaaaaacgggagccggttattatcgttatgaaaaagggagctatgcg
ccaattgcagatcctattgtcgagatggtgattgaagcttgcgcgaaagagaaggatatt
caccgcagagtatggagtgatgctgaaattgttgagcggacgatttttgccctgattaat
gaagggtttaaaattttagaagagggaattgtggctcactcaagcgctattgaccttgtt
tatattcacggctacggtttccccgcttatcgtgggggcccgatgttttatgccgatact
attgggttaccgaaagtattggaaaagatgaattattttgcaaagcattttggtaaacat
tggcagccttcggcattgctagttgatttagtggcaaaaggtttaagtgttacagattat
caaaaaaaggatgaatga
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