Idiomarina loihiensis L2TR: IL1335
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Entry
IL1335 CDS
T00218
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit, ATPase
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ilo
Idiomarina loihiensis L2TR
Pathway
ilo03030
DNA replication
ilo03430
Mismatch repair
ilo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ilo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IL1335 (holB)
03430 Mismatch repair
IL1335 (holB)
03440 Homologous recombination
IL1335 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ilo03032
]
IL1335 (holB)
03400 DNA repair and recombination proteins [BR:
ilo03400
]
IL1335 (holB)
Enzymes [BR:
ilo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IL1335 (holB)
DNA replication proteins [BR:
ilo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IL1335 (holB)
DNA repair and recombination proteins [BR:
ilo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IL1335 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
AAV82175
UniProt:
Q5QZ33
LinkDB
All DBs
Position
complement(1436996..1437856)
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AA seq
286 aa
AA seq
DB search
MAFPWLREPWLRLVASAEAGRLAHAYYLQHNVEGGSTEFIQRLNQFLLCKQPGKSACGKC
KSCLLYLSGNHPDTWTIDGAQVNRIGVDTVRELQQNVTQTANQNGLKVAVILEAEKMTEQ
AGNALLKVLEEPPADTHWLVSTKDAERLLPTLRSRMQWLSIAYPTTAQSDEQVTFAKQLL
AGLRGQQELPLLKDKDGALSWLDVSENLLMDWLLISQRAAATRLRYQQLADELQHISNYE
WVNVAQLSEWVSECRQLRQRYQGSTGINLPLLLSFAWSRWSNTLSA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcttttccctggctgcgagaaccctggttaagattagtagcgagtgctgaagccgga
cgtctggctcatgcgtactacttacagcataatgttgagggcggttcgactgagtttatt
cagcgcctgaatcaatttctgttgtgtaagcaaccaggcaaaagtgcctgcgggaaatgt
aaatcctgtttactttacctatcgggtaatcatccggatacttggactattgatggtgca
caagttaatcgaataggtgttgatacggtacgcgaattgcaacaaaacgtaacgcagaca
gcgaaccagaacggattaaaagtcgctgtcatactcgaagcggaaaaaatgacagaacag
gctggcaacgcactgctgaaagttctggaagaacctccggccgatacacattggctggtt
tcaactaaagatgccgagcgcttactgcccaccttaagaagccgtatgcagtggttgagc
attgcctatccgacaaccgcacaaagcgacgagcaggtgacttttgcaaagcagctgctg
gccggactacggggacagcaggaattacccctgttaaaagataaagatggcgcattaagc
tggctggatgtttccgagaacttattaatggattggttgttgattagccaacgagctgcg
gctacgcgtttgcgttatcagcaattggcggacgaattacaacacatcagcaactatgag
tgggtcaatgtcgcgcagctgagtgaatgggtatccgaatgccgacagctacgtcagcga
tatcagggctcaacggggatcaatttgccgttattattaagttttgcctggagtcgctgg
tcaaatactctttcagcgtag
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