Ipomoea nil (Japanese morning glory): 109170741
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Entry
109170741 CDS
T04663
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ini
Ipomoea nil (Japanese morning glory)
Pathway
ini03022
Basal transcription factors
ini03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109170741
09124 Replication and repair
03420 Nucleotide excision repair
109170741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109170741
03400 DNA repair and recombination proteins [BR:
ini03400
]
109170741
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109170741
DNA repair and recombination proteins [BR:
ini03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109170741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
DUF3593
Motif
Other DBs
NCBI-GeneID:
109170741
NCBI-ProteinID:
XP_019175439
LinkDB
All DBs
Position
Un
AA seq
466 aa
AA seq
DB search
MPQVRIVAKNFMDMVASLPAMKLDSLYDNPFICEAILRSLPPLAKKYVLQLLYIDSPIAA
KSIGEWVLADGSTKHKVAIDRLIQLRLLSETFDRKKDSSYQLNPKFQYNLRKHIVHGGIL
PREPMPSNITVRLPKLEELDAYASEQWECFLLHLISSSEAGKTINIRPSMMKVFQRGLMS
QRKYLMNYVFFLTFDRDDKEPPKLTESGFQFLLMDTNAQLWYIIREYITNAEESGVDSAD
LIAFLLELSFHVAGEAYNTNTLTEVQRSIIRDLGDLGLVKLQQGRKESWFIPTKLATNLS
ISLADTSSRKEGFVVVETNFRMYAYSSSKLHCEILRLFARVEYQLPNLIVGAITKESLYK
AFQNGISAEQIISFCQQNAHPRVAERIPAVPENVTDQIRLWESDLNRVEMMPAHLYEEFP
SRDAFEAACDFAREYGGLLWEDSKRMRIVVKAEILANMKEFLRRKQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaagtgaggatcgtcgcgaagaatttcatggacatggtggcttcattgcccgcc
atgaagctcgacagtctctatgataaccccttcatctgtgaagctattctcagatcacta
cctccattggcaaagaagtacgtactgcaactgctatacatagattcgccaatcgctgcc
aagtctattggggaatgggtacttgcagatggatccactaagcacaaagtagccattgat
agactaatacagttgagactattgagtgaaacttttgacaggaaaaaggatagttcttat
caattaaatccaaagttccaatacaatcttcgtaagcacatagtccatggtggaatttta
ccaagagaaccaatgccttcaaatatcaccgtgaggcttcctaagttggaggagttagat
gcctatgcctcagaacagtgggagtgcttcctgctgcaccttataagctccagtgaagct
ggcaagacaataaacataaggccttctatgatgaaggttttccagcgtggtcttatgagt
caaaggaagtatctaatgaactatgtattcttcttgacttttgacagagatgacaaagag
ccaccaaagttgactgaaagtggatttcagtttttgctgatggatactaatgcacagctt
tggtatatcatcagggagtacataaccaatgcagaggagagtggggtggattctgcagat
cttattgcatttcttttggagctcagcttccatgttgcaggggaggcatacaacacaaac
acattaactgaggtccagcgaagtataattagggaccttggagatctggggctggtcaag
ctacagcagggacggaaagagagttggtttatacctaccaaattagctaccaacctctca
attagcttggcagatacatcatcaaggaaagagggatttgttgttgtggaaacaaacttc
aggatgtacgcgtattcctcatcaaaattacattgtgagatcctgcgcctttttgctaga
gtggagtaccagcttccgaatctcattgttggtgctattacaaaagaaagcttgtacaaa
gcttttcaaaacggcataagtgctgagcagataatttctttctgtcagcagaacgcacat
ccaagggttgccgagagaataccagccgttccagaaaacgtcactgaccagattaggttg
tgggaatccgatctgaacagggttgaaatgatgccagcccatctttacgaggaattcccc
tcgagagacgcctttgaggctgcttgcgattttgcacgagaatatggaggattgctgtgg
gaggactctaagcgaatgcgaatcgtggtgaaggcagaaattcttgctaacatgaaagag
ttccttcgtcgaaagcaataa
DBGET
integrated database retrieval system
