Ipomoea nil (Japanese morning glory): 109191339
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Entry
109191339 CDS
T04663
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 33A-like
KO
K27472
mediator of RNA polymerase II transcription subunit 33
Organism
ini
Ipomoea nil (Japanese morning glory)
Brite
KEGG Orthology (KO) [BR:
ini00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ini03021
]
109191339
Transcription machinery [BR:
ini03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
109191339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xpo1
Motif
Other DBs
NCBI-GeneID:
109191339
NCBI-ProteinID:
XP_019197508
LinkDB
All DBs
Position
Un
AA seq
1318 aa
AA seq
DB search
MAVVSVQPSHWWDTAMELTKLAQDRGTDPLVYAMQLSSTLNAAGVAVPSTDVAALLVSHI
CWANNVPITWKFLEKALTIRVVPPLYVLALLSSRVIPNRRSYPVAYRLYMELLKRYVFSL
TSMINGPNHQKIMASINETLNLSEIFGIPECEAGLLMVEFVFASVWGLVDASLDDEGLLE
LTTEKESRWPIRTQDMEIDNRDTFDGKKAEQHELLFKKNTILATEILGEFFRNKVTSRIL
YLVRVNMPAHWESFIQHLRLLASNSTALRNSKNISPEALLQLTSDTNTFLPIECKTSTLH
RFNTVVTSSLVSSASQCHGTSPSAYWLPIDLFLEDAMDGTQVAATSAAETLTVLVKALQA
VYRTTWQDTFLGLWIAALRLVQRERHSSEGPVPRLDTCLCMLLSITPLAIVNIIEEEEKE
LNLANQGKESVGERRQDLVSSLKQLDDYEGLLTPPLQVASVANQAAAKAMLFLSGLTIPS
GYFDGMSMNDMPMNCAGNLRHLVVEACIARNILDTSAYFWPGYVKGRCNQIPCGISGQIP
GWSSLMKGSPITPSVISVLVSTPASSLAEIEKIYEIAVSGSDDEKISAATVLCGPSLTRS
WNIQEHIVLFITRLLSPPVPKDYTGSESHLIGYAPFLNVLLVGISSVDCIQIFSLHGLVP
QLAGALMPICEIFGSCAPNISWTLTTGEEISSHAVFSNAFTLLLKLWRFDQPPLEHVMGE
LRPVGSNLTPEYLLLVRNCQLSANENTQNQIKCKRFSRLLDPWFREPIFMDSFPKLKCWY
RQNQTCIASTLSGLVPGTPVHQVFEALLNFMFRKISRGAQPLTPTASGSSNSSGSGEDLS
MRLKIPAWDILEAIPFVLDAALTACAHGRLSPRELATGLKDLADFFPASLATIVSYFSSE
VTRGLWKPASMNGTDWPSPAANLALVEQQIKKILAATGVNVPSLTIGGNSPSTLPLPLAA
LVSLTITYKLDRATDRFLNLVGPALSNLATGCPWPCMPVIASLWAQKVKRWSDFLVFSAS
RTVFHHNSDAVVQLLRVCFRATLGLNTSITASSGGVGALLGHGFGSHFSDGISPVAPGIM
YLRVHRAVRNVLFMAEEIVSLLMCFVRDIANSGLPTETLEKLKKTKYGMRYGQVSLAAAI
TRVKLAASLGASLVWITGGLSLVQSLVKETLPSWFISVHTSEPQTGDSGGMVEMLRGYAL
AFFAVLSLTFAMGVDSTAMASRRAKVLATHMEFLASALEGKITLGCNGATWRAYVLGFVI
MMVNCTPNWMTEVDVGVVKQLSRGLKQWNEEELALALLGVSGVRGMGAAAEMIIESGV
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtgtccgtacagcccagccactggtgggatactgcgatggagctcactaag
ctggctcaggacaggggcactgaccccttggtgtacgccatgcagctctcctccacactc
aacgccgccggcgttgccgtgccctccaccgacgtcgccgccctcctcgtctcccacatc
tgctgggccaataacgttcctattacttggaagttcctcgagaaagccttgactatcagg
gttgtgcctccgctctacgttctcgctcttctctcttccagagtgattcctaacagaagg
agctatccagtggcctatagactgtatatggaacttctgaaaagatatgtcttttcattg
acatctatgattaatggcccaaatcatcaaaagattatggcatccatcaacgagactctt
aatctttcagagattttcgggattccagaatgtgaagctgggttgctaatggtggaattt
gtttttgcgagtgtgtgggggttagttgatgcatcacttgatgatgagggattgctggaa
ctcaccactgaaaaggaatctaggtggccaatcaggacacaagacatggaaatagacaac
cgggatacttttgacgggaagaaggcagaacaacatgagttattgtttaaaaagaatacc
atactggctactgaaatacttggtgaatttttccggaacaaagtgacttccaggatcctt
tacttggtgcgcgtgaacatgcctgctcactgggagtcatttatccagcatttgcggctg
cttgcttcaaactcaacagcattgagaaattcaaaaaatatttccccggaggctctgttg
cagctaacatctgatacaaatacattcctaccaattgaatgcaaaacaagcacactgcac
cggtttaatacggtagtgacttcttcacttgtatcttccgccagccaatgtcatggtacc
agtccatcagcttattggctgcccattgacctctttcttgaagacgccatggatgggaca
caagtggcagctacaagcgctgcagaaacactcactgttctagtgaaggctcttcaggca
gtttaccgtaccacttggcaggacacatttcttggattatggattgcagcactgcggctt
gtccaaagagaaaggcattcaagtgaaggaccagtaccccgccttgatacatgtttatgc
atgttgttgtcaattacaccacttgcaattgttaacattattgaggaggaggaaaaggaa
cttaaccttgccaatcaaggaaaagagtctgtgggagagcgtcgtcaagacttggtttca
agccttaaacagttagatgattatgaaggtttgttgactccaccactacaagtggcatca
gtggcaaatcaagccgctgcaaaagctatgttgtttctttctggtctaacgattccaagt
gggtactttgatggcatgagcatgaacgacatgcctatgaattgcgctggaaacttgaga
cacctggttgttgaggcttgtattgccagaaatattttggatacatctgcttatttctgg
cctggctatgtaaaaggtcgatgcaatcaaataccttgtggcatttcaggccaaatacct
ggctggtcttcattgatgaaagggtctcctataactccttcagtgataagtgtgttggtt
tcaacaccagcctcaagtttagcagaaatagagaaaatatatgagattgcagtcagtggt
tcagatgatgagaagatttctgctgctacagttctatgtggaccatctcttactcgtagt
tggaatatacaggaacatattgttctgttcatcacaagactgctttcacctccagtacct
aaagactacactggaagtgaaagccatttgataggttatgctccatttctgaatgttctt
cttgtcggaatatcatctgtcgattgtatacagattttttccttgcatggattggttcca
caacttgctggtgcattaatgccaatctgtgagatcttcggttcttgtgcacccaatatt
tcatggactcttacaactggggaggaaatatcttcccatgctgtattttcaaatgcattt
actcttctgctgaagttgtggagattcgatcagccacctcttgaacatgtaatgggagaa
ttacgtcctgtgggatccaatttaactcctgaatatttattattggtgcgcaactgtcag
ttgtctgcgaatgaaaatacacaaaaccaaatcaagtgcaagcgattttcaagactttta
gatccatggtttagagaacccatatttatggactcatttccaaagttaaaatgttggtac
aggcaaaatcagacgtgtattgcttcaacactttctggtcttgtacctggaactcctgtt
catcaagtttttgaagcactgctgaatttcatgttcagaaaaataagtaggggtgcacaa
cctcttacacctactgcttctggaagtagtaactcatctgggtctggagaagatttgtct
atgcgtcttaaaatacctgcatgggatattttagaagccattccatttgtgcttgatgcg
gccctaacagcctgtgcccatgggcggctttcaccacgtgaactagctacagggcttaag
gaccttgctgatttctttccggcttctttggcaacaattgtaagttatttctcatctgaa
gtaacgagaggtctttggaagcctgcctccatgaacggaactgattggccaagtccagct
gcaaatttagccttggttgagcaacagataaagaaaatcttagctgccactggcgttaat
gtccctagtcttaccattggtggaaactccccatctactttacctctacctctggcagca
cttgttagtctcaccattacttataaacttgatagagccactgaccgctttctaaacttg
gttggccctgccttgagtaacctggccactggttgtccctggccatgcatgcctgtcata
gcctctctctgggctcagaaggtaaaacggtggagtgacttccttgtcttctctgcatcc
cgtactgtattccaccacaacagcgatgccgtagttcaactccttcgggtctgcttcaga
gcgacattggggctaaatacttctattacggcaagcagtggtggtgttggtgcacttctt
ggtcatggatttggctctcatttttctgatggcatttctcctgttgctcctggtataatg
tacttgcgtgtgcatcgagctgttaggaatgtcctgtttatggcggaagaaatcgtttcc
cttctgatgtgttttgttagagacattgcaaacagtgggttacccacggagaccctggag
aaactcaagaaaacaaaatatggtatgagatacggtcaggtctcgctcgctgcagccata
acacgtgtcaagctagcagcttcgctgggtgcttctttagtttggattacaggtggcttg
agtttagtccaatcgctggtaaaggagacattgccatcttggttcatatcagtacacaca
tctgaaccccaaactggagactcggggggcatggtcgaaatgcttaggggctatgccctc
gcattctttgcagtgctttccttaacattcgcaatgggggttgactcaacggcaatggct
tctaggcgcgccaaggtgcttgccacgcacatggagtttcttgcaagcgcactcgaaggg
aagataactctaggatgcaacggtgcaacatggagagcgtatgtcttgggtttcgtaatc
atgatggtcaactgcacgccaaactggatgacagaggtggatgtaggcgtcgtaaagcag
ctgagcaggggattgaagcagtggaacgaggaggagttggctctcgcacttcttggagtt
agcggagtccgaggaatgggtgccgccgccgaaatgatcatagaaagcggagtgtga
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