Ipomoea nil (Japanese morning glory): 109191691 Help Entry 109191691         CDS       T04663                                  Name (RefSeq) DNA ligase 4   KO K10777   DNA ligase 4 [EC:6.5.1.1] Organism ini  Ipomoea nil (Japanese morning glory) Pathway ini03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:ini00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     109191691  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:ini03400]     109191691 Enzymes [BR:ini01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      109191691 DNA repair and recombination proteins [BR:ini03400]  Eukaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     DNA Ligase 4 complex      109191691 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N BRCT_2 BRCT DNA_ligase_A_C PTCB-BRCT RNA_ligase DNA_ligase_IV PRF Motif Other DBs NCBI-GeneID:  109191691 NCBI-ProteinID:  XP_019197873 LinkDB All DBs Position Un AA seq 1158 aa AA seqDB search MAASSGGEDIKFSVVVSMFQWIHKSKSKPLKQSKFRKFLDTFCRKPHDYFAAMRLILPGL DRDRGSYGLKEHVLATCIIDALGISRDSDDAHRLLNWRKAGPRAGLNAGNFSLVAAEVLQ RRQGVSSGGLTIKELNDLLDALASSVNRSEKTTVLSDLIRRTNAQEMKWIVMIILKDLKL GISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLALRVSN AAAAWKKLHGKEVVVECKFDGDRIQIHKNKAEMHFFSRNFFDHQEYAHAMSDIIAQNILV EKCILDGEMLVWDTSANRFAEFGSNQEIAKAAREGLDSDRQLCYVAFDVLYVGDTSVIHQ SLKERHELLRKVVKPIKGSLEILVPNGGLNAHRAPGELCWSVVGHGVDDVEKFFKATVEN RDEGIVLKDLNSKWEPSDRSGKWLKLKPEYIRAGSDLDVLIIGGYYGSGRHGGKVAQFLV GISERPSPGTYPRRFISFCRVGTGLSDEELDAVVTRLKPYFRKYEYPKQTPPSFYQVTNS SKERPDVWVESPEKSIIVSITSDIRTIRSEVFAAPYSLRFPRIDRVRYDKPWHECLDVQT FVELVHSSNGTTQRGAYSGRVKDHEPKHIKSKSRERKNALVVPSHFIQTDVSHIKGETSI FSNMVFYFANVPSSHTLDSLHKMVVEHGGTFSMNLNNSVTHCIAAESRGIKFQAAKLRGD VVNCSWLFDCCSQKRLLPLHPKYFLFLSDATKKKLQEEVDEFSDSYYSNLNIDDFKQLLS SICRSEKSKTVEYYKKKYCPKDKWCCFHYCSIHFFLHMHSSKSLDQKVLLELAMRRLKLE VSMGGGKVSDDLFHATHLVIISLPEFCVDFDTLLRSFSVSEGRVMCSNKLHVVGSQWLED CFEKNQKLPEGSYSLKPKNFEASAIKESESESMVEDHMGKHVIPSSTAKNVGTEKEVALE ESTVNMLPKRDGKRKRRASGRSTTRGRGKASIIKQPRRTKFGSKPARIDENESSESDGSR GIRQNKFGGSDNEENFEFKRWNGENISNHDPEIPVEYVIEDSKPLTEGKEIVEECIDKNG VGGEWNASKTLSQNPLDPVQSILLNMIPSLEKTSSSTSTSMDMGLEQEKPPPPLDLTPNP IKKKKVSYKDAVAALLKD NT seq 3477 nt NT seq  +upstreamnt  +downstreamnt atggcggcgagcagtggtggcgaagacatcaagttcagcgtggtggtgagcatgttccag tggatacacaagagcaaatccaagccgctaaaacagtccaagttccgaaagtttctggac actttctgccggaagcctcatgactacttcgctgcaatgcggctcatcctccctggcctc gaccgcgatcgcggctcctatggtctaaaagagcacgtgcttgccacctgcatcatcgac gccctcggcatatcccgcgactccgacgacgcccaccgcctcctcaactggcgcaaggct ggccctagagctggcctcaatgctggaaatttctcccttgtagccgctgaggtcctacag cgcaggcagggagtgtcttctggtgggctaacaataaaagaattaaacgatttgcttgat gccttagcttcaagtgtgaacagatctgagaagactactgttctttctgacctcattagg agaacaaatgctcaggaaatgaagtggattgttatgataattctcaaagatcttaagttg ggaattagtgaaaaaagcatctttcatgaattccatccagatgcagaagacttgttcaac gttacttgcgacttaaaacttgtctgtgaaaagttaagagatagaaatcaacggcataag cgccaggatattgaagttggaaaagcggtgcgccctcaactagctcttagggtcagcaat gcagctgctgcatggaagaagctccatggaaaggaagtagttgttgagtgcaaatttgat ggggatcgcatccagattcataaaaacaaagcagagatgcacttcttctctagaaacttt tttgatcatcaagagtatgcacatgcaatgtcagatatcattgcacagaatattcttgtg gagaaatgtatacttgatggtgaaatgttagtctgggacacatctgcaaatcgttttgca gagttcggttcaaatcaagaaatagcaaaggctgcaagggaaggacttgatagtgacagg cagttatgctatgttgcctttgatgttctttatgttggagataccagtgttattcaccaa agtttgaaagaacgacatgagcttctacgtaaggttgtgaagcctattaaaggtagcttg gagattttggttcctaatggtggccttaatgctcatcgtgctcctggagagctatgctgg tcagtcgttggtcatggtgtagatgatgttgagaagttttttaaagcaactgttgaaaac agagatgaaggaattgttctaaaagaccttaattcaaaatgggagcctagtgaccggagt ggaaagtggctaaagttgaaacctgagtatattcgggctggctctgatttggatgttctt atcattggaggttattatggatctggacgtcatggtgggaaggtggcacaatttttggtg ggtatttcggagcgtccatctcctggcacatatccaagaagattcatttctttctgcaga gtgggcacgggactctctgatgaagagcttgatgctgttgtgactagattaaaaccatat ttcaggaaatatgaatacccaaagcagacaccacctagcttctatcaagtaacaaacagt tcaaaagaaagaccagatgtctgggtggagagcccagaaaaatcaataattgtttctatc accagtgatattcgaacaataagatctgaggtgtttgctgcaccatacagcttgagattt ccacgtattgaccgggttagatatgacaagccttggcatgagtgtcttgatgtgcaaact tttgttgaattggtacattcaagcaatggtaccactcaaagaggggcatactccggaagg gtgaaggatcatgaaccaaagcatatcaagtctaagagccgtgagaggaagaatgcatta gttgttccttctcatttcatacagacagatgtctctcatattaagggtgaaacatcaata ttttcaaacatggtattttactttgctaatgtgccttcatcacatactctggattccttg cacaaaatggttgttgaacatgggggcactttctcaatgaatttgaataattcagtcact cattgcattgcagctgaaagtagagggatcaagtttcaggctgcaaagcttcggggagat gttgttaattgctcttggctctttgactgttgttcacaaaaaaggctccttcctctacat ccaaagtacttccttttcctttctgacgcaacaaagaaaaagttacaagaagaagttgat gagttctctgattcttactacagtaacctcaatattgatgattttaaacagctcttgagc agcatatgtcgatctgaaaagtctaaaactgttgaatactataagaagaaatattgtcca aaggataaatggtgttgttttcattattgcagcattcactttttccttcatatgcactct tcaaaaagtttggatcagaaggttttattggagcttgcaatgaggagattgaagcttgaa gtttccatgggaggtggcaaagtttccgatgatcttttccatgctacccatctggttatc atttcccttccagaattctgtgtggactttgacacattgttgaggagcttttctgtatca gaggggcgtgttatgtgcagtaacaaactgcatgtagtggggtcacaatggttagaagat tgttttgagaaaaaccagaagttgcctgagggtagttatagtctgaagcccaagaatttt gaagcatctgccattaaagagagtgaaagtgagtccatggttgaagaccatatgggcaag catgttataccatcttccacagctaaaaatgtgggaacggaaaaagaagtggctttggag gagtcgactgtgaacatgttgcctaagagggatggcaaaagaaaacggagagctagtggt agaagcacaactagaggtagagggaaagcaagcatcatcaaacagccacgaagaacaaag tttggaagcaaaccagctaggatagatgagaatgaatcaagtgaaagtgatggttcacgg ggaattaggcaaaataaatttggggggagtgataatgaagaaaactttgaattcaagaga tggaatggtgaaaatataagcaatcatgatccagaaatcccagtggaatatgtaattgaa gattcaaagccgctgacggaaggcaaagaaattgttgaagagtgtatagacaagaatggt gttggaggagaatggaatgctagcaaaaccttatctcaaaaccctctcgatccagtccaa tcaattttattgaatatgataccaagccttgagaagacatccagcagcaccagcaccagc atggatatgggtcttgagcaagaaaagccgccaccacctttagatctcacaccaaatcca ataaagaagaagaaagtgagctacaaggatgcagtagctgcattgctcaaggattag

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