Iodobacter ciconiae: EJO50_10765
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Entry
EJO50_10765 CDS
T05767
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
iod
Iodobacter ciconiae
Brite
KEGG Orthology (KO) [BR:
iod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iod03032
]
EJO50_10765 (topA)
03400 DNA repair and recombination proteins [BR:
iod03400
]
EJO50_10765 (topA)
Enzymes [BR:
iod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EJO50_10765 (topA)
DNA replication proteins [BR:
iod03032
]
Prokaryotic type
DNA Topoisomerases
EJO50_10765 (topA)
DNA repair and recombination proteins [BR:
iod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EJO50_10765 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AZN36919
UniProt:
A0A3S8ZTY8
LinkDB
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Position
complement(2495052..2497358)
Genome browser
AA seq
768 aa
AA seq
DB search
MPANLLIVESPSKAKTLLKYLGKDFQILASYGHVRGLVRKDGSVDTENDFKMKYQVIERN
KKHVDALVAAVKDATNIFLATDPDREGEAISWHIMEILRSKKLLTASRTFKRVVFHEITE
TAVLNAVANPRDIDSDLVNAQQARSALDYLVGFNLSPLLWRKVRSGLSAGRVQSPALRLI
CEREIEIRAFNSQEYWSVHLDTHQGRSKFGAKLTQWQGKKLEQFDIPDAGTQERILDALS
GQSAEIQSVDKKKKSRSAAAPFTTSTLQQEAVRKLGMTTDRAMRTAQQLYEGMSIGGETV
GLITYMRTDSVALANDALDEIRAYIGEKFEKEYLPGSPVIFKNKAKNAQEAHEAIRPTSI
YRSPDAVKAYLTADQFKLYQMIWKRTLASQIAAAKFDTVAVDIAVGPDAIFRATGQTLVF
PGFIAVYQEDTDDEEEEDEARLPVLNVGDKLPVDKLSGEQHFTQPPPRFTEASLVKSLEE
FGIGRPSTYASTIKTLKDREYVILDKKRFTPTDTGEVVNKFLTEHFTQYVDYNFTAKLED
KLDEISTGKRDWIPVLADFWKGFHKQCEEKAGLSRKEVTQEEMDEDCPKCGVAKLAIRLG
KRGRFIGCTTYPECDYTRNLGDDADTAPTEPEVVPDRTCPKCESVLHIKVGRYGKFIGCS
AYPKCKHIEPLEKPRDTGVECPECKKGSLIERKSRYGKLFYSCNTYPDCKYATWNPPVAE
CCPQCKWPVMTIKVTKRRGTEKVCPQKECGYVEVIEGPAPKAEKAEAE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcaaatctattgattgtcgaatcgccatccaaggcgaaaacgctgcttaaatat
cttggtaaggatttccagatccttgcttcctatggtcacgtccgtggtttggtcagaaag
gatggctcggtagacaccgagaatgactttaaaatgaagtatcaggtcatcgagcgaaat
aaaaaacacgtcgatgcactggtggctgctgtgaaagacgctactaatatctttctggca
actgacccggaccgcgaaggtgaagcaatttcctggcatatcatggaaattttacgttct
aaaaagttgctgacggcgagtcgcacttttaagcgcgtggtgttccatgaaattaccgaa
actgccgtgcttaatgccgtggcaaacccgcgggatattgatagcgatctggtgaatgcc
cagcaggcacgcagtgcgctggattatctggttggctttaatctgtcaccactgctttgg
cgtaaggtgcgctccggcctatcggctggccgcgtgcaaagccccgcactgcgtttgatt
tgtgagcgtgagattgagattcgtgcgtttaactcgcaagaatactggtcagttcacctc
gatacccatcaaggccgcagcaagtttggtgcaaagcttactcagtggcagggtaagaaa
ctagagcaattcgatattccggatgccggtacgcaggagcgcattcttgatgcgcttagc
ggccagagtgccgagattcaatcggtagacaagaaaaagaaatcgcgtagtgcagccgct
ccctttacaacctctaccttgcaacaggaagcggttcgtaagctgggaatgaccactgac
cgcgccatgcgcacggctcagcagctgtatgaagggatgagcatcggcggcgaaaccgtc
ggtttgattacctatatgcgtactgactcggtggctttagctaatgatgcgctggatgaa
atccgcgcgtacattggcgaaaaattcgagaaagaatacctgccgggttcaccggttatt
ttcaaaaataaagccaaaaatgctcaggaagcgcacgaagcgattcgtccgacttcgatt
tatcgctcaccggatgcggtaaaagcctatttaacggctgatcagttcaaactttatcaa
atgatttggaagcgcactctcgccagccagattgctgcagctaaatttgataccgttgcg
gttgatattgctgttggcccggatgcgattttccgcgctaccggccaaaccctggtgttc
cccggctttattgccgtttaccaggaagataccgatgatgaagaggaagaagacgaagca
cgtctgcctgtgctcaatgttggcgataagttgccggtagacaagctttccggcgagcag
cactttacccagccgccgccgcgctttactgaagcatctttggttaaatcgctggaagag
tttggtattggccgcccgtctacctatgcatcgacgattaaaacgctcaaagatcgcgag
tatgtgatcctcgataaaaagcgttttaccccgaccgataccggcgaagtggtcaataaa
tttctgactgagcattttacccagtacgtggattacaactttaccgccaagctggaagat
aagcttgacgagatttctaccggtaagcgtgattggattccggtgctggcagatttctgg
aaaggctttcataagcaatgtgaagaaaaagccggcttatcgcgtaaagaagtcacccag
gaagaaatggacgaagattgtccgaaatgtggtgtggcaaagcttgcgatccgcttaggt
aaacggggccgctttattggctgcaccacttatccggaatgcgattacacccgcaatctg
ggggatgacgccgatactgcgcctaccgagccggaagttgtgcctgatcgaacctgcccg
aagtgtgaatcggtattgcatatcaaggtggggcgttacggtaagtttattggttgctcg
gcctacccgaaatgtaagcatatcgagccactcgaaaagccgcgtgataccggtgttgag
tgtcctgaatgcaaaaaaggcagcctgatcgaaagaaaaagccgctacggcaagctcttt
tattcgtgcaatacttacccggattgcaaatatgctacttggaatccgccggttgccgag
tgttgcccgcagtgcaaatggccggtgatgacaatcaaagtgaccaagcgccgtggcacg
gagaaagtgtgtccgcaaaaagaatgtggctatgttgaagtgattgaaggccctgcgccc
aaagctgaaaaagccgaggctgagtaa
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