Isosphaera pallida: Isop_0887
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Entry
Isop_0887 CDS
T01407
Name
(GenBank) Peptidoglycan-binding lysin domain protein
Organism
ipa
Isosphaera pallida
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Motif
Other DBs
NCBI-ProteinID:
ADV61477
UniProt:
E8R2X3
LinkDB
All DBs
Position
complement(1245019..1250076)
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AA seq
1685 aa
AA seq
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MRNSGWTSTDAIAATDSNAVPIPDAVAHELACSDAFPTEDRPPTILVPTKLPNPAAGRAL
GTLGLPDFTSDHEPDDPDETIHDVPADEFDAQLHAGLEEEFGTDDDAWDNGPPSESDEEE
DADADADVEGLALSDLIPQTNPQPLIAPPSAAMPPITASSTVGSRPSTRVGPSSQPSSST
SETRFVVCDEDDGEYGPPAPSTPQIATDALQGSTSTSPEASANRGALQEALRTNGAPATQ
ASPDEVSSELRNQFTSADDQSSLPLSHDLPTEVNPVPVITEPHPLPPTTFTAPPHRERPG
RTGLSKWFSNRRARQRNGVVPTPPTPSNFNSSPRVTSDSNLNPPEQDHAHPLTPTTTTSS
PSARLASSATRGRRAWKARRVRMAAIVCSGTLSVALIARSLLDSTAGSGAIPIDSSAEAP
PPPQPASSLPILALRSQPAPTVDPATSSPTTIDHFNESLTPATRPDPTKSNPPSRNKSTN
QNAFLIDPRGLLLGESDLRRDDPPVEPIPRLDDSARLDSAENPGTKTNSAALVSNMPSTS
PEPLVPVMESASVPSDSLPSIDSSAETNPADSNTTSPPTESDSPHNPPVRSTETTDSSEP
SVSPGNPPDESESSPNPTSTESANDALPSNKPSASSSPQSSPEELDSLPAPTNTPPALEP
PSGTTQPPARIESDDQTSTHTENQPQAQSQDDVANEPPLTAPREEDLVAPPLDRDSVAPP
ATELLEPLPAPDSVLPPPLETPQSDSQHQAPPTEDVQNKDMTPPAQPFPVAPVQATIPTP
DNPIGDSRITATPNANASTPILEERAAPNAEPSDSAPDQSSASDMSPDALDFPELPTIEP
PSQADPQTPESPEMQPQPGGSADAEADSVPELGKPSEVPPTSNDEPTAARESHSLEPISA
PDESTSSTAPQKVQPPLTANRSGNPANPQPSPNTTATTGDSSDSPLSMPSRSVVAPPIPS
PTTTLPTTAETIASPTAPAPAEVNEEPIRPTITAPGSSHLNIESRPKTASDSDAMNKAAE
EAARAPILPPVTSTKVPTPPPSSHLLEETPAPDPSLELDPATEPPRSKIIIPPPLNPAGD
SAEDSASKPQPAPGLGLDLDPSVALPPREANVAVPDRVHSKPNHPDPFEVEAPAPTVPFK
TDSNSRPLPFPKDNAGDLDHRIASPGSAPNAPTTGTPNAPTISQPETKAANDVPSLNTFS
NQATSRDSAPERSDELETVLPTVSARSGGRIVAPTDPPPHAENSEALKQPQAATLAPAPA
ESLGGANPAASADDDGVIILPNLTHRQSNGTGPSNFERSPRGSSASVSDPVVSVARASDP
DPRPEPPDPSETAPTPAAPTPVPAPIVNPKPTNPATPSAQPSSSPSALEPPPASTENAAT
PATPRVQSNDDEVILLPNAPSLASRAGSTPSEEMERGTIPAAAASSERLGLPTAVSPSPS
IGSDTLSNDPFAESQRSNRSNMDRWTEVAPDTGSNSDPDADLATIPFDDRDAPIKEPLLH
VVKRGENFWTISKTYYGTARYYQALWAANRSTVPQIDELVVGKTIRIPPVEWLDRRYISP
ILAGSAQDQDTPKKRTSGSWDEATPANPRPPARRVNDNSNSFDRSTAESSNVVDTEAEER
PTSEGLFYRVRPYDTLKRLARDYLGDSRRASEILELNRDRIADPLHLEPGTRLRMPADAR
PRPRR
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgaggaactccggctggacctcgaccgacgcgatcgctgcaaccgactctaacgcggtg
ccgatccccgacgcggtcgcccacgaactggcgtgttccgacgccttccccaccgaggat
cgtcccccgacgatcctggtccccaccaagttgcccaacccagccgccggccgggcgctt
gggacgcttggactccccgacttcaccagcgaccacgaacccgacgacccggacgagacg
atccacgatgtgccggccgacgagttcgacgctcaactccacgccggtttggaagaggag
tttgggaccgacgacgacgcctgggacaacggcccgccgtcggagtccgacgaggaggag
gacgccgacgccgacgccgacgtcgagggattggccctctccgacctgatcccacaaacc
aatccccaaccgttgatcgcccccccgagcgctgcgatgccgccaatcaccgcgtcctcg
actgttggatctcgtccctccacccgagtggggccttcttctcaaccctcttcgtccacc
tcggagactcgctttgtggtctgtgacgaggatgacggcgagtacggcccccccgctcca
tccacaccccagatcgcaacggacgcgcttcaaggctcgacttcgacctcgcccgaggct
tcggcgaatcggggtgcccttcaagaggcgcttcgaactaacggtgctccggccacccaa
gcctcccccgacgaggtctcttccgaactccggaaccagttcacgtctgccgacgatcag
tcgtccctccccctgtcgcacgatctccccacggaggtgaacccggttcccgtcataact
gaaccccaccccctcccccccaccaccttcactgccccaccccaccgtgagcggcctggg
cgtactgggttgtcgaagtggttttccaaccgccgcgctcggcaacgcaacggggtggtt
ccaacgcctccgaccccatccaatttcaactcctctccccgagtgacgagcgattccaac
ctcaaccctcccgagcaagaccacgcccatcccctcaccccgaccacgaccacgtcctct
ccgtcggctcggctcgcctcctccgcgacacgcggtcgccgcgcttggaaagcacgccgc
gtccgtatggcggcaatcgtttgttccggcaccttgtcggtcgcgctaatcgcccgctcg
ttgttggattcaaccgccggctccggagcgattccaatcgactccagcgccgaagctcct
cctccccctcaacccgcttcctctcttccaatcctggcattgcggagccaaccggccccc
acagtcgatcccgccacctcctccccaacaacgatcgaccacttcaacgaatcgctaacc
ccggcgactcggcccgacccaacgaagtcgaatccacctagccgcaataaatcgacaaat
cagaatgccttcttaatcgacccacgcgggttgctcctgggtgaatccgatcttcgtcgc
gacgacccgcctgttgaaccaatccctcgcttggatgacagcgcaaggctggattctgcc
gagaatcccgggaccaaaaccaactcagccgcgttggtgagcaacatgccctctacttca
ccggagccgctcgttccggtgatggagtccgcctcggtcccgtcggattccctcccctcg
atcgactcgtcggcggagactaaccccgctgactccaacacaacctcacccccaacggaa
tcggactcgcctcacaacccgcctgttcgctcgactgaaacaaccgattcctccgagccc
tcggtctcccctggaaaccctccagacgaatccgaatcgtcgcccaacccgacctcaacc
gaatccgccaacgacgctttgccgtcgaacaagccatctgcgtcttcatctccccaatcg
tctcctgaggaactcgactccctacccgcgcccaccaacactccccccgccttggaaccg
cccagcggaacgactcaaccgccggctcgaatcgaatccgacgaccagacctcaacccac
acggaaaatcaacctcaagcccaaagccaagacgacgttgcgaacgaaccgccgctgacg
gcaccccgcgaagaggatctggtcgcgccgccgttggatcgggattccgtcgcgcctccc
gcgaccgagttgttggagccacttcccgctcccgattcggtccttcctccaccccttgaa
acacctcaatccgattcccagcaccaagccccccccaccgaagatgttcagaacaaggac
atgacgccaccggcgcaaccgttccctgttgcaccggtccaagcgaccatccccacgcca
gataacccgatcggggattcccgaatcacggccaccccaaacgcaaacgcctccacgccc
attctcgaagagcgggccgcacccaacgccgagccatccgactccgcgcccgatcaaagc
tcggcctccgacatgtcgcccgacgcccttgatttccccgagttgcccacgatcgaacct
ccttcgcaggccgatcctcaaacgcccgaatctcccgagatgcagccgcaacctggtgga
tcagcggacgcggaagcggattcggtgcccgaactcggaaaaccgtccgaagtgccgcca
acctccaacgacgagccgacggcggcgcgggagtctcattccctagaaccaatttccgcg
ccggatgagtccacttcgtccaccgccccccaaaaggttcaaccgcccctgacggcgaat
cgaagcggcaaccccgccaatccgcagccatctccgaacaccaccgcgacgacgggcgac
tcgtccgattcgcctttgtcgatgcctagtcgctcggttgtggctccgcccatcccctcc
ccaacgacaaccctgcccacaaccgctgagacaatcgcatcaccaaccgctcccgcgccc
gcggaggtgaatgaagagccgatccgccccacgatcacggctccgggttcttctcatctc
aacatcgagtcccgccccaaaaccgcttccgacagcgacgcgatgaacaaagccgcggag
gaagccgcgcgagctccgatcctgcctccggtgacctccaccaaggtgcccacaccacca
ccgtcatcccatttgttagaggagactccagcccccgatccgtcgctcgaactcgatccg
gcgaccgaaccacctcgttcaaagatcatcatccccccacccctgaaccccgcgggcgac
agcgctgaggattccgcctcgaaacctcaacccgcccctggactgggtctggatctcgat
ccctccgttgccttgcccccgcgggaggctaacgtcgccgtccccgatcgcgtccattcc
aagccgaatcatcccgatcccttcgaggtagaggctcccgctcccaccgttcccttcaaa
accgactccaactctcgccccctcccatttccgaaggacaatgcgggtgatctcgatcat
cggatcgcgtccccggggtccgcaccaaacgcaccgaccaccggaacccccaacgctccc
accatttcacaacctgagaccaaggcggcgaatgacgtcccttctctgaacacgttctcg
aatcaagcgacgagtcgggactctgccccagagcgatcggatgagttggagacggtcctc
cccacggtttccgctcgaagtggtggccggatcgtcgcgccaactgaccccccccctcac
gctgaaaactccgaggctctgaagcaacctcaagccgcgacactcgctcccgccccagcc
gaaagcctgggcggtgccaacccggcggcgagcgcggacgacgacggggtgatcatcctg
ccgaacctgacccacaggcagtcgaacggcaccgggccgtccaacttcgagcgctcaccc
cgtggttcaagcgcatcggtttccgatccggtggtctcggtggcgcgggcttcggacccc
gacccccgacccgagccgccggacccatccgagacggctccaacgccggccgcacctacc
ccggtccccgcgccgatcgtcaacccgaaaccaaccaacccggccaccccgtcggctcaa
cccagttccagcccatccgcgctggaaccgccccccgcctcgaccgaaaacgccgccacg
ccggccacgccgcgagttcagtccaacgacgacgaggtgattctcctacccaacgctccc
tcgttggcctcgcgagcaggttccaccccgtccgaggagatggaacggggaaccatccca
gccgcggcggcctcgtccgagcgactcgggttaccgaccgcggtctcaccctccccgtcg
atcggctccgacacgctttctaacgatcccttcgccgagtcgcaacgatccaaccgttcc
aatatggaccgttggaccgaggttgcacccgacaccggctccaattccgatcccgacgcc
gaccttgcgacgattccgtttgacgaccgcgacgcaccgatcaaggaaccgttgcttcat
gtagtgaagcggggcgaaaacttttggaccatctccaaaacctactacggcaccgcccgc
tactaccaggcgctctgggcagccaaccgttcgaccgtcccccaaatcgatgaactcgtg
gtgggcaagacgatccggattccccccgtggagtggctcgatcgccgctacatcagcccg
attttggccggatcggcccaggaccaggacactccgaagaagcgcaccagcgggtcgtgg
gacgaggcgacgcccgccaacccgcgtccccccgcccgacgggtcaacgacaactccaac
tccttcgaccgttccaccgccgagtcgtccaacgtcgtggacaccgaggccgaagaacga
ccaaccagcgagggtctgttctaccgagtgcggccctacgacaccctcaagcggttggcc
cgcgactacctgggcgatagccgtcgcgcttcggaaatcctcgaactcaaccgcgatcgc
atcgccgacccgctccatctagagccggggacacggctccgaatgcccgccgacgctcgg
ccgcgtccgcgtcgttga
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