Ictalurus punctatus (channel catfish): 100304832
Help
Entry
100304832 CDS
T04658
Name
(RefSeq) methylcrotonoyl-CoA carboxylase beta chain, mitochondrial
KO
K01969
3-methylcrotonyl-CoA carboxylase beta subunit [EC:
6.4.1.4
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00280
Valine, leucine and isoleucine degradation
ipu01100
Metabolic pathways
Module
ipu_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
100304832
Enzymes [BR:
ipu01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
100304832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carboxyl_trans
Motif
Other DBs
NCBI-GeneID:
100304832
NCBI-ProteinID:
XP_017307639
Ensembl:
ENSIPUG00000012419
UniProt:
W5UIA6
LinkDB
All DBs
Position
22:complement(11781568..11788560)
Genome browser
AA seq
563 aa
AA seq
DB search
MILQTIRPAMAFLRSRSVISRLYHAEKVATLGSQTDIQSPVYQENYERMQALVKELKDRA
EKIKLGGGERARKLHTSRGKLLPRERIDRLLDPGSPFLEFSQFAAYELYGNEEVPAGGII
TGIGRVSGVECIVVANDATVKGGTYYPVTVKKHLRAQEIAQQNHLPCIYLVDSGGANLPR
QADVFPDRDHFGRIFYNQAHLSSEGIAQIAVVMGSCTAGGAYVPAMADESIIVSKQGTIF
LGGPPLVKAATGEEVSAEDLGGADLHCRKSGVTDHYALDDDHALHLARKAVRNLNYQKKL
DVTVEPPEAPLFPADELYGIVGENLKRNFDIKEVIARIVDGSKFDEFKAFYGDTLVTGFA
RIFGYPVGIIANNGVLFSESAKKATHFIELCCQRNIPLIFLQNITGFMVGREYEAGGIAK
DGAKMVTAVACANVPKFTVIIGGSYGAGNYGMCGRAYSPRFLYLWPNSRISVMGGEQAAN
VLATITKDQKAREGKELTAEQEAALKKPIISRFEEEGSPYYSSARLWDDGIIDPADTRLV
LGLSLSAALNAPTQKTRFGVFRM
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgatactacagactattagaccagctatggcctttcttcgtagcaggagcgtcatatcg
agactttaccatgcagagaaagtcgcgacactgggctcccagacagacatacagtctccc
gtgtatcaggaaaactatgaacgcatgcaagccctggtcaaggaactgaaagacagagca
gaaaagataaagctcggtggaggagagagagctaggaaactgcacacatccagaggaaag
cttttacctcgggagcgcattgacaggctgctggacccgggctctccatttctggagttt
tcccagtttgctgcttatgaattgtacggtaatgaggaagtacctgctggaggaatcatc
actggcattggcagggtgtccggggtggagtgtatcgtagtcgcaaacgatgccactgtc
aaaggaggcacctattatccggttactgtgaagaaacaccttcgagcacaggagattgcg
cagcagaaccacttgccatgtatttacctggtggactctggaggggccaacttaccccga
caggctgacgtctttcctgatagagatcactttggacgcatcttttacaaccaggcacac
ttgtcctcagagggcattgcacagattgctgtagtgatgggctcttgtacagcagggggt
gcctatgtccccgccatggcagatgaaagcatcattgtgagcaaacaaggaaccattttt
cttgggggacctccactggtaaaagctgctacaggtgaggaagtctctgctgaagacctt
ggaggtgctgatcttcactgcagaaaatctggtgtaactgatcactacgccttagatgat
gatcatgctcttcacctggcacggaaagcagtgcgcaacctgaactaccagaagaaactg
gatgttactgtggaacctcccgaggctccgttattcccagctgacgagctttatggcatc
gtgggagagaacttgaaacgaaattttgacatcaaagaggtgatcgcccgtatagttgat
ggcagtaaatttgacgaattcaaggccttctatggagacacactggtaacaggtttcgca
aggatatttggttatcctgtcgggatcattgccaataatggagtgctattctcagaatca
gcaaaaaaagcaactcattttattgagctgtgctgtcaaaggaacattcccctgatcttc
cttcagaacatcacaggatttatggttgggagagagtacgaggcaggcggcattgctaaa
gacggtgctaagatggtgacagctgtggcctgtgctaatgtgcccaagttcactgtaatc
attggcggatcctatggggctggaaactacggcatgtgtggaagagcatacagtccccga
ttcctgtacttgtggccgaactcgcgcatctcagtgatgggaggagagcaagcagcgaat
gtgctggccaccattactaaagatcagaaagccagggaagggaaagagcttacagcagaa
caggaggctgctttgaagaagcctattatcagccgatttgaggaggagggaagtccgtat
tactccagtgccagactatgggatgatggaatcattgaccctgctgacacgcggctcgtc
ctaggactcagtctgagtgccgctctcaacgcccccacgcagaagactcgctttggtgtc
ttcaggatgtga
DBGET
integrated database retrieval system
