Ictalurus punctatus (channel catfish): 108254761
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Entry
108254761 CDS
T04658
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase BAP1 isoform X1
KO
K08588
ubiquitin carboxyl-terminal hydrolase BAP1 [EC:
3.4.19.12
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108254761
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108254761
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108254761
03036 Chromosome and associated proteins [BR:
ipu03036
]
108254761
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108254761
Peptidases and inhibitors [BR:
ipu01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
108254761
Ubiquitin system [BR:
ipu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
108254761
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
108254761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Motif
Other DBs
NCBI-GeneID:
108254761
NCBI-ProteinID:
XP_017305533
Ensembl:
ENSIPUG00000019690
UniProt:
A0A2D0PH12
LinkDB
All DBs
Position
21:complement(20216676..20228296)
Genome browser
AA seq
784 aa
AA seq
DB search
MSLIGFYQIKAAGHFVSSHSGLFTLLVEDFGVKGVQVEEIYDLQSKCQSPVYGFIFLFKW
IEERRSRRKVSTLVDETSVIDDDIVNDMFFAHQLIPNSCATHALLSVLLNCSGVELGSTL
SRMKAFTKGFNPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGISAVRTMEAFHFVS
YVPIKDRLFELDGLKAYPIDHGPWGEEEEWTDKARRVIMERIGLATAGEPYHDIRFNLMA
VVPDRRVKYESRLEVLKRNRQIVLEGLQQSIRASQTDTTQERKQQDSSSEDTPATVKKEE
GSDTPVAPAAAPPTDSAEVASVPAASVSSEKPKAAVKPPTLPPGGASTGPNPVVQRLPAF
LDNHNYAKSPMQEEEDLAAGVARARAPGPPQAPYSDDEDEDEDEEEDRFRKKAGVRGRGV
ARSSAGGGGGGVSGVEGQLALNMLAERLKKAERKDTMATTAMPGSSALNVRTEGRTGGIS
ITPACQPSPTPSNESTDTASEIGSAFNSPLRSPARSQMLQGVVERGVSKAVGGSVSFGTL
AVPQAATRPSSPVACHLSRVLFGDDDVLLRLDTRHNRAVRELGALISSTQLQLREDGTIY
TLPSADAVCDVVKKAGGADGKEPSDRSEGGGAGGEEDGGKGGASRELKREKECAETSKDK
PRAETPNFVEPEALTKPLGEKYTPKELLALLKCVEADIANYEVYLKEEVEKRKKYKIDDQ
RRTHNYDEFICTFISMLAQEGMLASLVEQNISVRRRQGVSIGRLHKQRKPDRRKRSRPYK
AKRQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgatcggtttttatcagatcaaagcagcaggacatttcgtcagttcgcattca
ggtctcttcacactgctggtggaggatttcggtgtgaagggtgttcaggtggaggagatc
tacgacctgcagagtaaatgccagagtcccgtgtacggctttatcttcctgttcaaatgg
atcgaggagcgtcgctccaggaggaaagtgtccactctggtggacgagacctcggttatc
gacgacgacatcgtcaacgacatgttcttcgctcaccaactgattccaaactcgtgtgcg
actcatgccttactgagcgtgctcctgaactgcagcggggtggagctgggcagcacactg
agccgcatgaaggccttcaccaaggggttcaatccagagagcaaaggctacgccattggg
aatgctccggagttagcaaaggcacacaacagtcatgccaggcccgagccacggcacctg
ccagagaaacagaacggcatcagtgctgtgaggacgatggaggccttccacttcgtcagc
tacgtccccattaaagaccgactgttcgagctggacggcctcaaagcctaccccattgac
cacggtccttggggagaggaggaggagtggacagacaaagctcggagggtcattatggag
agaatcggcctggcgaccgcaggcgagccgtaccacgacatccgcttcaacctgatggcg
gtggttcctgaccgcagggtgaagtacgagtccaggctggaggtgctcaaacgcaatcgg
cagatcgttctggaaggactgcagcagtcgatcagggcatcccaaacagacacgacacag
gaacgcaagcagcaagactcctcctccgaggacacacccgctactgtaaaaaaggaggag
gggtcagatacaccggtagcacctgctgcggctccacccacagactcggctgaggtggcg
agtgttcctgcagcgtccgtctcctcagagaaacccaaagccgcagtgaagccgcctact
ctgcctccagggggcgccagcaccggccccaaccctgtcgttcagcgcctgcccgccttc
ctggacaaccacaactacgcaaagtcccccatgcaggaggaggaggacctggctgcagga
gtggctcgtgctcgtgcccctggaccccctcaagccccgtactctgatgatgaggatgaa
gatgaggatgaagaggaggacaggttccgcaaaaaggcgggtgttcgtggacggggcgtg
gcccggagtagtgctggtgggggtggaggcggagtctcgggcgtggagggccagctggct
ctgaacatgcttgctgagagactcaaaaaggcagagagaaaggacaccatggcaacaacg
gcgatgcccggctcctccgccctgaacgtgcgcacggagggccgaaccggtggcatcagc
atcacgcccgcctgccagccctcgcccacgcccagcaacgagagcacggacacggcctcc
gagatcggcagcgccttcaactcgccgctgaggtctcccgcgcgctcgcagatgctccag
ggcgttgtcgagagaggagtatctaaagcagtgggtggttctgtgagtttcggtactctt
gccgtcccgcaggctgccactcgaccctccagccccgtggcctgccacctgagccgcgtg
ctgttcggagacgacgacgtcctgctgagactggacactcgacacaaccgcgccgtccga
gagctcggagccctgatcagctccactcagctacagctcagagaggacggaaccatctac
acactgccaagtgcagacgcggtgtgtgacgtggtgaagaaggcaggcggagcggatggt
aaggagccgagtgaccggtcggagggaggaggtgcgggtggagaggaggatggagggaaa
ggaggagcgtcccgggagctaaaacgggagaaagagtgcgcagagacgagcaaagacaag
ccgagagcggagacgccgaactttgtggagcctgaggcactcaccaagccgcttggggag
aaatacactcctaaagagttgttggcgctgctgaagtgcgtggaggccgatatcgccaat
tacgaggtgtatctgaaagaggaggtggagaaacggaagaaatacaagattgatgaccag
agaaggacccataactacgatgagttcatctgcaccttcatttccatgctggcacaggaa
ggtatgctggcgagcctggtggagcagaacatttccgtgcgcaggcggcagggcgtgagc
atcggccgcctgcataaacagcgcaagccggaccgaagaaagcgatctcggccgtacaaa
gccaagcgccagtga
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integrated database retrieval system
