Ictalurus punctatus (channel catfish): 108255108
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Entry
108255108 CDS
T04658
Symbol
si:dkey-222f2.1
Name
(RefSeq) intermediate filament protein ON3
KO
K07605
type II keratin, basic
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108255108 (si:dkey-222f2.1)
04147 Exosome [BR:
ipu04147
]
108255108 (si:dkey-222f2.1)
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
108255108 (si:dkey-222f2.1)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108255108 (si:dkey-222f2.1)
Exosomal proteins of other body fluids (saliva and urine)
108255108 (si:dkey-222f2.1)
Exosomal proteins of colorectal cancer cells
108255108 (si:dkey-222f2.1)
Exosomal proteins of bladder cancer cells
108255108 (si:dkey-222f2.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Keratin_2_head
CENP-F_leu_zip
TPR_MLP1_2
AAA_13
DUF4349
BRE1
SlyX
DUF3450
DUF4201
Prefoldin
ADIP
IFT20
Jnk-SapK_ap_N
DUF720
Ribosomal_S30AE
FapA
Motif
Other DBs
NCBI-GeneID:
108255108
NCBI-ProteinID:
XP_017306281
Ensembl:
ENSIPUG00000009514
UniProt:
A0A2D0PLI7
LinkDB
All DBs
Position
21:complement(4987902..4994928)
Genome browser
AA seq
440 aa
AA seq
DB search
MSLRSKRISSSCSVRSSGKLGGYGGYSSGFSTMSLGALSPSFSTSSTYLGAPIANISVNK
SLLAPLNLEIDPNLQMVRTQEKDQMKSLNNRFASFIDKVRFLEQQNKMLETKFEVLQSQT
PGRSNIEPMFEAYMANLRRQLDVVNNDKIKLDGELRNMQGLVEDFKHKYEDEINKRNNLE
NDFVILKKDVDSAYLVKADLEDKVGALTDEINFLKTIYDEELREMQASITETSVTVQMDN
SRNLNMDQIVAEVKFQYEEIAVKSREEAEAWYKSKYDQMASQATQYGNELRNTKAEIGEL
NRMISRLQSEIESIKAQRTNMENQIAEAEERGELTVKDAKARIRDLEDALQRAKQDMARQ
LREYQELMNVKLALDIEIATYRKLLEGEEDRIGQQAIGNIQSMSSYSSKGMNGYQQFSSP
SPKLLIKTTEIRDTTRFTTH
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgaggagcaagaggatcagttcgagctgttctgtaaggagcagtgggaagctt
ggcggctatggaggctatagcagtgggtttagcacaatgtcccttggagcgttgtcaccc
agcttcagcaccagcagcacctacttgggtgcccccatagctaacatctcggtcaacaaa
agcctgctggctcccctcaacctggagatcgaccccaacctccagatggtgcgcactcag
gaaaaagaccagatgaaatctcttaacaaccgctttgcctccttcatcgacaaggtgagg
ttcctagagcagcagaacaagatgctggagaccaaatttgaagttcttcagagtcagacc
ccaggcaggtctaacattgagcccatgtttgaggcttatatggccaatctgcgcagacag
ctcgatgtggtcaacaacgataaaatcaagctggacggagagctgaggaacatgcagggg
ctggtggaagacttcaagcacaagtacgaggatgagatcaacaagagaaacaacctagag
aatgactttgtgattctgaaaaaggatgtagactctgcatacctggtgaaagctgatttg
gaagacaaagtgggtgcgctgactgatgagatcaacttcctcaagactatttacgacgag
gagctgcgtgagatgcaggccagcatcactgaaacctctgtcacagtgcagatggacaac
tcccgcaacctcaacatggaccagattgtggccgaggtcaagttccaatatgaagagatc
gcagtcaagagccgtgaggaagctgaggcctggtacaagtctaagtatgaccagatggcc
agccaggccacacagtacgggaacgagctgaggaacaccaaggctgagatcggtgagctc
aaccgcatgatcagccgtctgcaaagcgaaattgagtccatcaaggcccagcgcactaac
atggagaaccagatcgccgaggcagaggagcgtggtgagctgacagtgaaggatgccaaa
gctcgcatcagagacctggaggacgcgctgcagagagccaagcaggacatggcacgccag
ctgcgggagtaccaggagctcatgaacgtcaagctggcactggacatcgagattgccact
tataggaagctgttggagggcgaggaggacagaattggacagcaggccattggcaacatt
caatccatgtccagttacagctccaaaggaatgaacggctaccagcagttcagctctcca
tcccctaaactgctgatcaaaaccaccgagattagagacaccaccagattcactacacac
tga
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