Ictalurus punctatus (channel catfish): 108257580
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Entry
108257580 CDS
T04658
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108257580
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108257580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_10
PRP1_N
UPF0242
DUF2721
LMBR1
Tex_YqgF
Fib_alpha
Zn_ribbon_SprT
DUF496
DUF4407
Motif
Other DBs
NCBI-GeneID:
108257580
NCBI-ProteinID:
XP_017310965
Ensembl:
ENSIPUG00000013341
UniProt:
A0A2D0Q0Q9
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Position
2:complement(1852084..1855980)
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AA seq
594 aa
AA seq
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MYFRDDKTDSRVSLVPSLCLSLSHIVCECRKMTEASISVDQDHFICPVCLDLLKDPVAIP
CGHSYCKVCINISWDQEDQKGVYSCPQCRDTFTPRPVLRRNSMLAEVVEKLKKTEVQAAS
PAHCYAGPGDVECDFCTGRKHKAVKSCLMCVASFCEIHLKPHYQSPAFKIHTLIEPSAEL
REKICSEHDEVLKIYCRTDQICICSLCMLDKHKGHDAVLVAAGRSEKQSELKEEQMKSQQ
RIQEKQKKVQELKQSVNTIKLGAQTAVEDSERIFTEMISSMEKRHSEVTERIRAQEKAEL
SRAERLLEQLEQEIADLQRRVTELEQLSHTHDHLHFLQALASGRRSPPLDRAEFQTSSIT
DRQHLSFDGVRNSLSDLKKRLEEFCEEEFNKLLPQDAAVQIISPSEPQTREDFLKYFCYL
TLDPNTTYRYLILSNKNRLLTAHGTERKYSDSPERFSHFPQVLSKESVCGRCYWEVEWRS
HGHVAISVSYKDISRKGRGNKCEFGLNDQSWSLRCSSSSHSFYHNNIKTDLSVPSSSRIG
VYVDHSAGTLSFYSLSDTMKLLHRVHTTFTQPLYAGFRIYGGFYSVKVRLCDPV
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcagagatgacaaaactgatagcagagtctctctcgttccctctctctgtctc
tctctctctcacatagtgtgtgagtgcaggaaaatgaccgaggccagtatttcagtagat
caggatcatttcatctgtccagtgtgtctggatctcctgaaggatccggtggcgatcccc
tgtggtcacagttactgtaaggtgtgtattaatatctcctgggatcaggaggatcagaag
ggcgtctacagctgtcctcagtgcagagacactttcactccgaggcctgttctacgcaga
aacagcatgctggctgaagtggtggagaaactgaagaagactgaagtccaagctgcttct
cctgctcactgttacgctggacctggagatgtggagtgtgatttctgcaccgggagaaaa
cacaaagccgtcaagtcctgtctgatgtgtgtggcctcattttgtgaaattcatctgaaa
cctcactatcagtctcctgcatttaagatacacacgttaatcgaaccttctgcagaacta
cgagagaagatctgctctgaacatgatgaagtgctgaagatctactgccggaccgaccaa
atatgtatctgctctttgtgcatgttggataagcataaaggacacgatgctgtattagtt
gcagcaggaagatctgagaaacagagtgagttaaaggaggagcagatgaaatcccagcag
agaatccaggagaagcagaagaaggtgcaggagctgaaacaatctgtgaacactataaag
ctcggtgcacagacagcagtggaggacagtgagaggatctttactgagatgatcagctcc
atggagaaaaggcactcggaggtgacagagcggatcagagctcaggagaaggctgaactg
agtcgagctgaacgactcctggagcaactggagcaggagatcgctgatcttcagaggaga
gtcactgagctggagcagctttcacacacacacgatcacctccacttcctccaggcttta
gcgtctggacgtcggtctcctccattagacagagcagagtttcagacatccagcatcact
gaccgtcaacatctctcatttgatggagtgaggaattctctctcggacctgaagaagaga
ctcgaggaattctgtgaggaggaattcaacaaactccttccacaggatgcagcagttcag
attatttcaccatcagagccacagaccagagaagactttctgaaatatttctgttatctg
actctggatcccaacacaacatatcgctacctcattctgtctaataagaacagattgttg
acagcccatggaacagagcggaagtactctgatagtccagaaagattttcgcactttcct
caggtgttgagtaaggagagcgtgtgtggacgctgttactgggaggtggagtggagaagt
cacggacatgtggccatatcggtctcatataaagacatcagcaggaaaggacggggtaac
aagtgcgagtttggactcaacgatcagtcctggagtctgcggtgttcttcttcttctcac
tctttctatcacaacaacattaagactgatctcagtgttccatcgtcctccagaatagga
gtgtatgtggatcacagtgcaggaactctgtccttctacagcctctctgacacgatgaag
ctcctccacagagtccacaccacattcactcagcctctatacgctgggttccggatttat
gggggattttattctgtaaaagtaaggttgtgtgatccagtataa
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