Ictalurus punctatus (channel catfish): 108257599
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Entry
108257599 CDS
T04658
Symbol
dpf3
Name
(RefSeq) zinc finger protein DPF3 isoform X1
KO
K22198
BRG1-associated factor 45B/C
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108257599 (dpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108257599 (dpf3)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108257599 (dpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHD_4
PHD_2
Prok-RING_1
C1_1
Motif
Other DBs
NCBI-GeneID:
108257599
NCBI-ProteinID:
XP_053531638
Ensembl:
ENSIPUG00000019062
UniProt:
A0A9F7RAK4
LinkDB
All DBs
Position
25:complement(17513858..17548755)
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AA seq
395 aa
AA seq
DB search
MATVIHNPLKALGDQFYKEAIEHCRSYNARLCAERSVRMPFLDSQTGVAQNNCYIWMEKR
HRGPGLAAGQMYTYPARCWRKKRRLHPPIDPQLRLCELRLEAELMAKRETPPAEATALET
LIRGDALLDKRSSSSKEEETLLEIQRVLEAEENGDGFHDEDEFEVETPKRKQRNKGRGRG
SSRKKTESVTGDDQDKPYVCDNRYKQKHNSKSADSVCGKRYKNRPGLSYHYTHTHLAEEE
GEEEREPEIPQSPPENKTQNHKLQKGSDGAVIANDYCDFCLGDSGSNRKTGQAEDLVSCS
DCGRSGHPTCLQFTENMMQAVRTYQWQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYC
LKPPMTQPPEGSWSCHLCLDSLKDKASAFGEAKTL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgtcattcacaatccactaaaagctctcggcgatcagttctacaaggaggcc
atcgagcactgtcgcagctacaacgcccgcctgtgtgccgagcgcagcgtccgaatgccg
ttcctggactcgcagacgggcgtggctcagaacaactgctacatctggatggagaagcga
cacagggggccaggactggctgcgggtcagatgtacacctaccccgcccgctgttggaga
aagaagaggcgactgcatccgccaatcgaccctcagctcagactgtgtgaactcaggctt
gaagccgagttgatggcgaagagagaaactcccccggcggaggccacggcactggagaca
ctgatcagaggagacgcccttctggacaaaaggagcagcagctccaaggaggaagagact
ctgctggagattcagagggtgctcgaggcagaggaaaacggagacggtttccatgatgag
gacgagtttgaagtcgagacgccgaagaggaagcagagaaataaaggcaggggtcgaggt
tcgagccgtaagaagacggagtcggtgacgggtgatgatcaggacaaaccctacgtgtgt
gacaacagatacaaacaaaagcataactcaaaatcggctgactcagtttgtggtaagcgt
tataagaaccggcccggactgagctaccactacacgcacacacacctggctgaggaggaa
ggcgaggaggagagagaacccgagatccctcaatcaccaccggaaaacaagactcaaaac
cacaagctgcagaagggatctgacggcgcggtcatcgctaacgactactgcgacttctgt
ctcggggactcgggctctaacaggaagacgggccaagccgaggatctggtgtcgtgttcg
gactgcggacgctccggccacccgacttgccttcagttcacagagaacatgatgcaggcg
gtgaggacgtaccagtggcagtgcatcgagtgcaaatcgtgcagcctgtgtggcacctca
gagaacgacgatcagctcctgttctgtgacgactgcgatcggggatatcacatgtactgc
ctcaaacctcccatgactcagccgcctgaaggaagctggagctgccatctttgcttggac
tcactaaaggacaaggcgtctgcttttggagaagcaaaaacactgtaa
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