Ictalurus punctatus (channel catfish): 108257886
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Entry
108257886 CDS
T04658
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108257886
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108257886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
zf-RING_10
EzrA
PRP1_N
Baculo_PEP_C
Zn_ribbon_SprT
PPP1R32
UPF0242
AMP-binding_C_2
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
108257886
NCBI-ProteinID:
XP_017311498
Ensembl:
ENSIPUG00000014556
UniProt:
A0A2D0PYC4
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Position
2:complement(1003613..1007206)
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AA seq
560 aa
AA seq
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MAEASISVDQDQFSCPVCLDLLKDPVAIPCGHSFCKVCINDCWDQEDQKGVYSCPQCRDT
FTPRPVLRRNNMLAEVVEKLKRTEVQAASPAHCYAGPGDVECDFCTGRKHKAVKSCLMCL
ASFCETHLKPHLEIPALKKHTLIEASAKLQEKICSQHDKIMEIYCRTDQTYICYLCMMDN
HKGHDTVTVTAERAEKQRELKEEQMKSQQRIQEKQKKVQELKQAVNTIKFQTQTAVEDSE
RIFTEMISSMEKRRSEVTELIRAQEKAELSRAERLLEQLEQEIADLQRRVTELEQLSHTH
DHLHFLQTFASGRRSPPLDRAEFQTSSITDLQHLSFDGVRNSLSDLKKRLEEFCEEEFNK
LLPHAAAVQQAISPSEPESREDFLKYFHYLTLDPNTAYRHLRLSENDRVARYSERKMTFF
DHPESFECFAQVLCKESVCGRCYWEVEWSGDGVSISVSYKGIGRKGRGDECLFGRNNQSW
SLWCSSSSLSFYHNNIKTELRVPSSSRIGVYVDHSAGTLSFYSVSDTMRLFHRVRTTFTQ
PLYTGFWVGIQSLVRLGDPK
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccagtatttcagtagatcaggatcagttcagctgtccagtctgtctggat
ctcctgaaggatccggtggcgatcccctgtggtcacagtttctgtaaggtgtgtattaat
gactgctgggatcaggaggatcagaagggcgtctacagctgtcctcagtgcagagacact
ttcactccgaggcctgttctacgcagaaacaacatgctggctgaagtggtggagaaactg
aagaggactgaagtccaagctgcttctcctgctcactgttacgctggacctggagatgtg
gagtgtgatttctgcaccgggaggaaacacaaagccgtcaagtcctgtctgatgtgtctg
gcttcattttgtgaaactcatctgaaacctcatctagaaattcctgctttgaaaaaacac
acattaatcgaagcctcagcaaaactacaagagaagatctgctctcaacatgataaaata
atggagatctactgtcgtaccgatcagacctacatctgttacttgtgtatgatggataat
cacaaaggacacgacaccgtcacagtcacagcagaaagagccgagaaacagagagagtta
aaggaggagcagatgaaatcccagcagagaatccaggagaagcagaagaaggtgcaggag
ctgaaacaggctgtgaacactataaagttccaaacacagacagcagtggaggacagtgag
aggatctttactgagatgatcagctccatggagaaaaggcgctcggaggtgacggagctg
atcagagctcaggagaaggctgaactgagtcgagctgaacgactcctggagcaactggag
caggagatcgctgatcttcagaggagagtcactgagctggagcagctttcacacacacac
gatcacctccacttcctccagactttcgcttctggacgtcggtctcctccattagacaga
gcagagtttcagacatccagcatcactgaccttcaacatctctcatttgatggagtgagg
aattctctctcggacctgaagaagagactcgaggaattctgtgaggaggaattcaacaaa
ctccttccacatgctgcagcggttcagcaggcgatttcaccatcagagccagaaagcaga
gaagattttctgaaatatttccattatctgactctggatccaaacacggcatatcgtcac
ctcagactgtctgagaacgacagagtggcgaggtacagcgagagaaagatgacgttcttt
gatcatccagaaagctttgaatgctttgctcaggtgttgtgtaaggagagtgtgtgtgga
cgctgttactgggaggtggagtggagcggtgatggtgtgtccatatcggtctcatataaa
ggaatcggaaggaaaggacggggtgatgagtgtctgtttggacgcaacaatcagtcctgg
agtctgtggtgttcttcttcttccctctctttctatcacaacaacattaagaccgagctc
agagttccatcatcctccagaataggagtgtatgtggatcacagtgcaggaactctgtcc
ttctacagcgtctctgacacgatgagactcttccacagagtccgcaccacattcactcag
cctctatacaccgggttctgggtgggtattcaatcacttgtgaggttgggtgatccaaaa
taa
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