Ictalurus punctatus (channel catfish): 108260001
Help
Entry
108260001 CDS
T04658
Symbol
nova1
Name
(RefSeq) RNA-binding protein Nova-1 isoform X2
KO
K14944
RNA-binding protein Nova
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108260001 (nova1)
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108260001 (nova1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KhpA-B_KH
DUF1233
Motif
Other DBs
NCBI-GeneID:
108260001
NCBI-ProteinID:
XP_017315388
Ensembl:
ENSIPUG00000018651
UniProt:
A0A2D0Q9M1
LinkDB
All DBs
Position
28:1674464..1709845
Genome browser
AA seq
471 aa
AA seq
DB search
MESEALDSRKRPLETPTEAGSTKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQK
ETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSSQKSEPVSILQ
PQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKSVMEQSGAWVQLSQKPEGINLQERVV
TVSGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSNVTGPVANSNPTGSPYANSAEVLPS
AAAAAAATASTLLGQAGLASFPSAMSGFSGNDLLAITSALNTLASYGYNTNTLGLGLNPA
AASGVLAAVAASANPAAAAAANLLASYASEASGGAAHPAAPGLAGFSLGSLAAATGASNG
YLNPATSPLVASSLLGTEKLAEGGKEVLEIAVPENLVGAILGKGGKTLVEYQELTGARIQ
ISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRITYEQGVRATNPQKVG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgaggcgctggattcccgaaaaagaccgctggagactccgactgaggcggga
agcaccaagcgcactaacacaggagaagagggtgagtacttcttgaaagtgctgatcccc
agctatgcggccggttcaattattggtaaaggaggacagaccatcgtccagctgcagaaa
gagactggcgccaccatcaaactgtccaaatctaaagacttctacccaggtacgacagag
cgcgtgtgtttaatccagggtacggtcgaggcgctgaacggcgttcataacttcatcgca
gagaaagtgcgcgagatgccacaaagcagccagaaaagcgaaccggtcagcatcctgcaa
cctcaaaccaccgttaaccccgaccgagtcaaacaggctaaactgatcgtgcccaacagc
acagctgggctgatcattggtaagggtggagcaacggtgaagtcagtgatggagcagtcg
ggcgcgtgggtgcagctctcacagaaacctgagggcatcaacctgcaggagagagtggtg
accgtgagcggcgagcccgagcagaaccgcaaggctgtagagattattgtgcagaagatc
caggaggacccacagagcagtagctgtctcaacatcagctactccaatgtcacaggacct
gtggccaattccaaccccacaggctcaccatatgccaacagtgcagaggttctgcctagt
gctgctgctgctgccgctgccactgcgtccacgctgctgggccaggcgggccttgccagc
ttcccctctgcaatgtctggcttttccggcaatgacctgctggccatcacctctgccctg
aacacgctcgccagttatggctacaacaccaacactctggggcttggcctgaacccagca
gccgcctctggagtgttagccgccgttgctgctagtgctaaccctgcagccgctgctgca
gccaacctcttagcatcgtacgccagcgaggcatccggaggagcggctcacccggctgca
cctgggcttgccggcttctcactgggttctctagcagctgccacgggagcttccaacggc
tacctgaacccggcaacctccccgctggtggcctcctcactgctggggactgagaaactt
gccgagggtggaaaggaggtgctggagattgccgtgcccgagaacctggtgggcgccatt
ttagggaaaggggggaagacgctggtggagtaccaggagctgacaggggctcgcatccag
atctccaagaagggcgaattcatcccgggcacgcgcaaccgcaaagtgaccatcacaggg
tcgccggcagcaacgcaggccgcgcagtatctcatcagccagcggatcacgtacgagcaa
ggcgtccgtgccacaaaccctcagaaagtgggctag
DBGET
integrated database retrieval system
