Ictalurus punctatus (channel catfish): 108260288
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Entry
108260288 CDS
T04658
Symbol
arhgap35b
Name
(RefSeq) rho GTPase-activating protein 35
KO
K05732
glucocorticoid receptor DNA-binding factor 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04510
Focal adhesion
ipu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108260288 (arhgap35b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
108260288 (arhgap35b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108260288 (arhgap35b)
Membrane trafficking [BR:
ipu04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108260288 (arhgap35b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
RhoGAP-FF1
Ras
GTP_EFTU
Cdh1_DBD_1
FF
Motif
Other DBs
NCBI-GeneID:
108260288
NCBI-ProteinID:
XP_017315919
Ensembl:
ENSIPUG00000019567
UniProt:
A0A2D0QCA7
LinkDB
All DBs
Position
28:2048013..2055980
Genome browser
AA seq
1511 aa
AA seq
DB search
MMAKKQDSRVPTYNLVVVGLSGTEKEKGPCGVGKSCLCNRFVRPSADDFHLDHTSVLSTS
DFGGRVVNNDHFLFWGEVERVLEDGTECRMHVVEQTEFIDDQTFQPHRSTALQPYIKRAA
STKLASAEKLMYFCTDQLGLEQDFEQKQMPEGKLQVDGFLLCVDVSRGMNRSFDDQMKFV
TNLYNHLGKTKKPVALVLTKCDEGVERYIKDSHTFAINKKNLQVVETSARSNVNVDLAFL
TLIQLIDKGRGKHKIIPYFEALKHQSQIIATAKDRYEWLVNHIVKNHNENWPAISRRMQP
SPEYKEYVFLEGTAKAKKLFQQHVHRLKQEHIERRRKAYLTALPLALGSLVSELSEIEHL
SWSGVQKVLESKKDFDHWFVVLEDAPWEDTPHLDNMEDERIPFDVLDTTAAEIIFDAHLE
HLRNECKRAEMRHEFKMKLASSPFVTPGKPWEEARSFIMSEDFYQWLEEPEYLDIYNRHQ
KVIIDRAKEDFQELLLEYSELFYELEVDAKPSKEKMGAIQEALGEEQRFKALQKLQAERD
ALVLKHIHFVYHPTKDTCPSCPYCIDNKIEQILASCFPMRYPSFGKSHMHESKAERINLV
ILGKDGLARELANEIRAMCANDDYYVLEGKLYELILRPIEGNVRLPVNSFHTATFTPHGC
LCLYNSKESLSYVLESIEKLRESTLGRRDNHIAQLPLSLLLVTKRGVGALSDLGGETAQI
LITQGQQVAMKLQCEFLEPASPGSGYGRNVNEKQINQVLKGLLDTRRSAVFRSGSPSSPP
LPPSIRDIQQDQNPEADLRIVMCLMCGDSYDVDQLLSPFLLPQHCRPTNSSGNSVVLEQT
VGDNRLTIELSLLSYHASFTMRKSRLVHGYIGVYSARRKASLETLCALLCEVPDIVPVQL
LAVGETETELTDSESARELLVQGEELAHEIEGRFACVVCGPGGVVGGLHRIDLLQSFFME
VAEKKTLVEATHVYDNAAEACSTNENVYSPHCGSPSPVTMLLDYEEDMEASPPYFDGTLT
SHSGFKLPDLESADTFSVISELSTFENKLNSKVPLHMRSKPSVTFDFRKHNFNPYMDTSH
RRSLTSNVTWPPCGDGVYDPSDYAEPMDAVSKPRPSHEENIYSVPHDSTQGKIITIRNSN
RMHSNGGVNGSDSEGDGSSLERRRKFSSAGVKPRLYRDRSKRLGKFSSFRTSFSIGSDDE
FGGLPKTKEDDVAVLKGESLIEEGDDKKRNILRSLRRPGKKTRLKPRHSISKPLESTYFG
VPLVNVVSPDRPIPLFIDKCIRFIEATGLTTEGLYRVSGNKSEMESMQRQFEQDHGLDLV
EKDFPVNTVAGALKSFFSELPDPLVPYSLQVELVEAFKINDREQRLQTMKDVLRRFPREN
YEVFKHVMGHLNKVSQWNRVNLMTSENLSICFWPTLMRPDFTTMDALTATRTYQTIIETF
IHQCAFFFYNQAPAESPTGLYGTPTPSALPPSPSAAPLCTPQPPHFSPALHSPPGSPPQS
PLTVPAETHTL
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgaaaaagcaagattcacgggtgcctacctacaacctagttgtagttggtctt
tcgggcactgagaaagagaagggcccctgcggagttggcaagtcttgcctctgtaatcgc
ttcgtccgccctagcgcggacgactttcacctcgatcacacgtctgtgctgagtaccagt
gatttcggtggtcgagtggtcaacaacgatcatttcctgttctggggagaggtggaacga
gtcttggaggatggcactgagtgtaggatgcatgtggtggagcaaacggagtttatcgat
gaccagacctttcaaccacatcgtagcacagctttacagccttacatcaaaagagctgcc
tccacgaagctggcctctgcggaaaaactcatgtacttttgtacagaccagttgggtctg
gagcaggactttgagcaaaaacaaatgcccgagggaaagctgcaggtagacgggtttcta
ctctgcgtcgatgtaagtcgagggatgaaccgcagctttgatgatcaaatgaaatttgtt
accaacctgtataatcatctgggtaaaactaaaaagcctgttgcactggttctcaccaag
tgtgatgaaggagttgagcgatacatcaaggactctcatacgtttgccatcaacaaaaag
aacttgcaagttgttgagacatcagctcggtctaatgtcaacgtggacttagctttcctt
actctgattcaactcattgataagggaaggggcaagcacaagataataccttattttgag
gctttaaagcatcagagtcaaataattgccaccgcaaaggacagatacgagtggttagtg
aaccacatagtgaagaatcacaacgagaactggcctgctatcagccgacgtatgcagcca
tcaccagaatacaaggaatacgtctttttagaaggtacagctaaagcaaaaaagcttttc
cagcagcacgttcatcggcttaaacaggagcacatcgagagacgtcgtaaagcgtattta
accgctctcccactcgccttgggttccttggtgtccgaactgtctgaaattgagcattta
agctggtctggggtgcagaaggtactggagtccaaaaaggactttgaccattggtttgtg
gttctggaggacgcgccatgggaagacacgccacatcttgacaatatggaagatgagcgc
ataccctttgacgtgctggacacaactgccgcggaaatcatatttgatgcgcatctcgaa
catttgcgcaacgagtgcaagcgtgccgagatgcgacatgaatttaagatgaagctggcg
tcctcgcccttcgtcacccctggcaagccttgggaagaggcacggagcttcataatgagc
gaagacttctaccagtggttggaggagccagaatacctggatatctacaacaggcaccaa
aaggtgatcatagacagggcaaaggaggatttccaggagcttctgctggagtattcggag
cttttttatgaacttgaagtggatgctaagccaagtaaagaaaagatgggggcaattcag
gaagcactgggagaagagcagcgcttcaaggcattacagaaactgcaggcagaaagagac
gccttagttttaaagcacatccattttgtctatcacccgaccaaggatacttgtccgagc
tgcccgtactgcatcgacaacaagatcgagcagatattagcctcgtgcttccctatgcgc
tatccttcctttggaaagtctcatatgcatgaaagcaaagcagaacggattaacttagtg
attctaggcaaagatggtttagcaagagagttggctaacgagattcgagctatgtgtgcc
aacgacgactactacgtgcttgaaggcaaattatacgagctaatactcaggcctattgag
ggtaacgttaggcttccggttaactccttccatactgctacattcacacctcatgggtgc
ctgtgtctgtacaattccaaggaatctttgtcttatgttctagaaagtatcgagaagttg
cgtgagtcaacgcttggcaggagggataaccacatagctcagcttcctttgtctcttttg
ttagtcactaagagaggtgtaggggctttgagtgaccttggtggggagactgcccaaatc
ttaatcacgcagggtcagcaggtagccatgaagctgcagtgtgaatttttggagccggca
tcccctggctcaggctacgggcggaatgtgaacgagaaacagatcaaccaagtgttaaaa
ggtttgttagatacaagaaggagcgccgtgtttcgtagcggttccccgtcttcaccccct
ttacctccgagcatcagagacatccagcaggaccagaatccggaggcagacttgcgtatt
gtcatgtgcctgatgtgtggagattcctacgacgtagaccaacttctctcacccttctta
ctgcctcagcattgcaggccaaccaattccagtggtaactcagtggtgcttgagcagaca
gtcggtgacaacaggctgacaatagagctgtccctactatcatatcatgcttcttttacc
atgcgcaagagtcggctcgtacacgggtacataggtgtgtactctgctcgccgcaaagcc
tcgttggaaaccttgtgtgccttactctgtgaggttccagacattgttccagtccaactg
ctagctgtgggagaaacagagacggagctcacggactccgagtctgcacgtgagctgttg
gtccagggcgaagaactggcccatgaaatcgagggtcgttttgcctgcgtggtctgtgga
ccaggcggagttgttggaggactgcacagaatagacctcctacaatctttcttcatggag
gtcgcggagaagaagactctcgttgaggcaactcatgtgtacgataacgcagcagaggcc
tgtagcacaaacgagaacgtgtattcaccccattgcggttcccctagccctgtaactatg
ctgttagattatgaggaggacatggaagcttcaccgccttactttgacggaaccctcacc
tctcatagcggattcaagctccctgatttggagtcggccgacacgttctcggtcatctct
gaactcagtacttttgagaacaagttgaacagcaaagtccctttacatatgaggtccaaa
cccagtgtcacttttgacttcagaaagcacaactttaacccctacatggacaccagccat
cggcggtcccttacctccaatgtcacctggcctccctgtggggacggggtgtatgatccg
tctgactatgctgagccaatggatgctgtttccaagcctcgacccagccatgaggagaac
atatactctgtaccacacgacagcacgcagggcaagatcatcaccatacggaactccaac
cgaatgcactcgaacggaggcgtgaacggctcagatagcgaaggcgacggcagctctttg
gagcggcgcaggaagttctcttctgccggagtaaaaccccgattgtacagagatcgatcc
aagcgcctaggcaagttcagcagcttccgcaccagtttctctatcggcagcgacgacgaa
ttcggcggtcttccaaaaacgaaggaggatgacgtggccgttttgaaaggagagtcgctg
attgaggaaggggacgataagaaaaggaacattctgaggagccttcgtcgtccaggcaaa
aaaaccagactaaagccccgacactcgatctccaaacctctggagagtacttactttggg
gtgccattagttaatgtcgtgtcacctgacagacccatcccgctgttcatcgacaaatgt
atccgcttcattgaggccacagggttgactacggagggtctatatagagtgagtggaaac
aagtcagagatggagagcatgcagcggcagtttgagcaggaccacggcctggacctggtg
gaaaaggactttccggtgaacacggtagctggcgctttaaagagctttttctctgagttg
cccgatccattggtcccatacagtctacaagtggagctggtggaagctttcaagataaat
gaccgagagcagagactgcagaccatgaaggacgtgctgaggagatttcctcgggagaat
tacgaagttttcaaacatgtcatgggccacctgaacaaggtcagccagtggaacagagtc
aacctgatgaccagcgagaacctgtccatctgcttctggcctacactcatgcggcccgac
ttcaccaccatggacgctctcacggccacgcgcacctaccagaccatcatcgagaccttc
atccatcagtgcgcctttttcttctacaaccaagctcccgccgagtctcccacaggcctc
tatggcacgccgacgccctctgccttgcccccttcgcccagcgccgcccccttgtgcacc
cctcaacctccgcacttcagcccggcgcttcattcacccccgggctcaccccctcagagc
cccctcaccgtccccgcggagacacacacactgtga
DBGET
integrated database retrieval system