Ictalurus punctatus (channel catfish): 108260601
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Entry
108260601 CDS
T04658
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00052
Galactose metabolism
ipu00511
Other glycan degradation
ipu00531
Glycosaminoglycan degradation
ipu00600
Sphingolipid metabolism
ipu00604
Glycosphingolipid biosynthesis - ganglio series
ipu01100
Metabolic pathways
ipu04142
Lysosome
Module
ipu_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
108260601
09103 Lipid metabolism
00600 Sphingolipid metabolism
108260601
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108260601
00604 Glycosphingolipid biosynthesis - ganglio series
108260601
00511 Other glycan degradation
108260601
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108260601
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108260601
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
108260601
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108260601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
108260601
NCBI-ProteinID:
XP_017316499
Ensembl:
ENSIPUG00000016904
UniProt:
A0A2D0QDX8
LinkDB
All DBs
Position
29:16062658..16073140
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AA seq
655 aa
AA seq
DB search
MILSRTGALFCFTLIIPLTLSVAAPSFTVDYKNNSFLKDGEYFRYISGSIHYSRIPRSYW
KDRLLKMYMAGLNAVQTYVPWNFHEPVPGVYDFSGDRDLEYFLQLCQDVGLLVILRPGPY
ICAEWDMGGLPAWLLKKKDIVLRSSDPDYLAAVDKWMAKLLPMMKPYLYQNRGPIITVQV
ENEYGSYFACDFDYLRHLLKLFRSHLGGDVVLFSTDGAGVNYLKCGALQGVYATVDFGPG
GNVTAAFEAQRHSEPHGPLVNSEFYTGWLDHWGEHHSVVQTEAVVKSLNEILELGANVNL
YMFIGGTNFAYWNGANTPYAPQPTSYDYDAPLTEAGDLTQKYFAIRDVIKKYKKIPDGVL
PPSTPKFAYGAVQMKKLRTVSESLDILSMSGPVKSLYPLTFVELNQHFGFVLYRTSLPVD
CLNPTPLSSPLNGVHDRAYVSVDRRAVGILERDRTISINITGKAGSRLDLLVENMGRVNY
GKYINDFKGLVSNLTLGAETLRNWTVFSLSIDEVVKEGLLWDTVSLQDSDSAHTATPPTY
LSPPTFYGGTLEIPDHIPDLPQDTYIQFPDWSKGQVWINGVNVGRYWPSRGPQVTLFVPA
SLLSTTSPNNITVLELEACPCTRGQCVVEFTHTPLINSTVTHIKPYTREKTLNTL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgtccagaactggagctttattctgctttacactcatcatccctctcacactc
tctgtagctgctccgagttttacagtagattataaaaacaacagcttcctgaaggatgga
gaatatttccgctacatctccggcagtattcactacagcaggatccccaggtcctactgg
aaagaccggctgttgaagatgtacatggcgggactcaacgccgtccagacgtacgtcccc
tggaacttccacgagcccgtgccaggtgtgtacgacttcagcggagatcgagatctggaa
tatttcctccagctgtgtcaggacgtcggcctgctggtcatcctgagacccggaccctac
atctgtgccgagtgggacatgggaggcctacctgcttggttactgaagaagaaagacatt
gtccttcgctcgtcagatccagattatttagcagctgtggataaatggatggcgaagttg
ttacctatgatgaagccttacctttatcagaacaggggaccgattattacagtacaggtg
gagaacgagtacggaagttactttgcgtgtgattttgattacctgcgtcacctgctgaaa
ctgttccgctctcacctggggggcgacgtggtcctgttcagcaccgacggagccggagtc
aattacctgaagtgtggagcgctgcagggcgtctacgccaccgtcgacttcgggcccggt
ggaaacgtgactgcagcttttgaagctcagagacactctgaacctcacggcccgctggtg
aattcggagttttacaccggctggctcgatcactggggagaacatcactctgtcgttcag
actgaagctgtggtcaaatcccttaacgagatcctggaactcggagcaaacgtcaacctg
tacatgtttatcggaggaactaattttgcctattggaatggtgcgaacactccgtacgct
ccccagcccaccagctacgactacgacgctccgctgacggaggccggagacctgacgcag
aaatacttcgccatccgtgacgtcattaaaaagtataagaagataccagatggcgttttg
ccgccgtctacaccgaagtttgcgtacggagccgtgcagatgaagaaattgaggactgta
tcagaatctctggacattctctcgatgtctggtcctgtaaaatctctttacccgctcacg
tttgtcgagctcaatcagcacttcggctttgttctgtatcggacgtcacttcctgtggac
tgtttaaacccgactcctctctcgtctcctctaaacggagttcacgaccgagcgtacgtc
tccgtagaccgacgggctgtagggattctggagcgagacaggactatcagtattaatatc
acggggaaggccgggagcagactggacctgctggtggagaacatgggccgagtcaattac
ggaaaatacatcaacgacttcaagggtctggtgtcgaatctcacactgggagcagaaact
ctaaggaactggaccgtgtttagtctcagtatagacgaggtggtgaaggaggggctgctg
tgggacacggtctctctacaggacagtgactctgcccacactgctaccccgcccacttat
ctgtccccgcccacattctatggcggtacgttggagattcctgatcacatccctgacctg
ccacaggacacgtacatccagttccccgactggagcaagggtcaggtgtggattaacggc
gtgaacgtgggtcgttattggccgtctcgtggtcctcaggtcactctgttcgttcctgcg
tctctcctcagcaccacgtcgcccaataacatcacagtgctggagctggaggcgtgtccc
tgcacccggggacagtgtgtggtcgagttcacacacacaccactcatcaactccactgtc
acacacatcaaaccttacacaagggagaaaacactgaacacgctctga
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