Ictalurus punctatus (channel catfish): 108261256
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Entry
108261256 CDS
T04658
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108261256
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108261256
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
U-box
Zn_ribbon_SprT
PRP1_N
DUF4407
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
108261256
NCBI-ProteinID:
XP_017317642
UniProt:
A0A2D0QH14
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Position
12:complement(27944848..27950597)
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AA seq
572 aa
AA seq
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MAEGRISADQLSVDQFSCPVCLDLLKDPVTIPCGHSFCNVCINDCWDQEEKSGMYRCPHC
RDTFTPRPVLRRNNMLAEVVEKLKKTQIQAASPAHCYAEPGDVACDFCTGRKRKAVKSCL
MCLASFCEAHLKPHYEVPALKKHKLVEASGNLQEKICSEHDKVIEIYCRTDQSFICYLCM
TDKHRGHNTVSIKSYTSEKQSELKEEQIKSQQRIQEKQKKMEELKQTVNTIKRSAQIAVE
DSERIFTEMISSMEKRRSEVTELIRAQEKAELSRAERLLEQLEQEIADLQRKVTELEQLS
HTDDHLHFLQEIKVLVSGRRSPQFNRPNFQSDLREDSRSITVNQHFSFDEVRKSLSALKK
GLEEFCQEELIKIPEHVEDVQMLLSEPKSRVEFLKYFCHLTLDQNTAHYNLILSEKNRVV
TGRETKKSYFDHPERFDSWEQVLCKESVCGCCYWEVEWSSEKWVFISVSYKDISRKGEGE
ECVFGRNNQSWSLQCSSSSLYFWHNYIETELRVPSSSRIGVYVDHSAGTLSFYSVSNKMK
LLHRIRTTFTQPLYAGFWLPYYGSTVRLCDTK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggccgagggcagaatttcagcagatcagctttcagtggatcagttcagctgtccagtt
tgtctggatctactgaaggatccggtgactatcccctgcggtcacagtttctgtaatgtg
tgtattaatgactgctgggatcaggaagagaagagcggaatgtaccgctgtcctcactgc
agagacactttcactccaaggcctgttctacgcagaaacaacatgctggctgaagtggtg
gagaaactgaagaagactcaaatccaagcggcttctcctgctcactgttacgctgaacct
ggagatgtggcgtgtgatttctgcaccgggagaaaacgcaaagccgtcaagtcctgtctg
atgtgtctggcctccttttgtgaagctcatctcaaacctcactatgaagttcctgctttg
aaaaaacacaagttggttgaagcttctggaaatctacaagagaagatctgctctgagcat
gataaagtgatcgagatctactgtcgtacagaccaaagcttcatctgttatctgtgtatg
acggataaacacagaggacacaatactgtgtcaattaaatcatatacatctgaaaaacag
agtgagttaaaagaggagcagattaaatcccagcagagaatccaggagaagcagaagaag
atggaggaactgaaacagactgtgaacactataaagcgcagtgcacagatagcagtggag
gacagtgagaggatctttactgagatgatcagctccatggagaaaaggcgctcggaggtg
acggagctgatcagagctcaggagaaggctgaactgagtcgagctgaacgactcctggag
caactggagcaggagatcgctgatcttcagaggaaagtcactgagctggagcagctttca
cacacagatgatcacctccacttcctccaggaaataaaggttttagtctccggccgtcgc
tctccccaatttaacagaccaaattttcagtctgatctccgtgaggattcacgcagcatc
actgtcaatcaacatttctcatttgatgaagtgaggaaatcgctctctgctctgaaaaag
ggactagaggaattctgccaggaggaactcatcaaaatccctgaacatgttgaggacgtt
cagatgttactctcagagccaaagagcagagtcgagtttctgaaatatttctgtcatctg
actctggatcaaaatacagcacattataacctcattctgtctgagaagaacagagtggtg
acaggccgtgagacaaagaagtcgtactttgatcatccagagagatttgattcctgggaa
caggtgttgtgtaaggagagtgtgtgtggatgctgttactgggaggtggagtggagcagt
gaaaaatgggtgttcatatcagtctcatataaagacatcagcaggaaaggagagggtgaa
gagtgtgtgtttggacgcaacaatcagtcctggagtctgcagtgttcttcttcttctctc
tatttctggcacaactacattgagactgagctcagagttccatcatcctccagaatagga
gtgtatgtggatcacagtgcaggaactctgtccttctacagtgtctctaacaagatgaag
ctcctccacagaatccgcaccacattcactcagcctctgtacgctggattctggcttcct
tattatggatcaactgtgagattatgtgatacaaaataa
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