Ictalurus punctatus (channel catfish): 108262070
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Entry
108262070 CDS
T04658
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108262070
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108262070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
U-box
PRP1_N
zf-RING_5
zf-RING_10
eIF3_subunit
Zn_ribbon_SprT
DUF6591
Fib_alpha
REST_helical
Motif
Other DBs
NCBI-GeneID:
108262070
NCBI-ProteinID:
XP_053543319
UniProt:
A0A9F7TS25
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All DBs
Position
17:20386042..20392288
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AA seq
556 aa
AA seq
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MEKAGISVDQDQFICPVCLDLLKDPVTTPCGHNYCKVCINGCWDQEYLKGVYSCPQCRET
FTPRPVLRRNNMLAEMLEKLKKTELHAASPAHCYAGPGDVECDSCTGRKHKAVKSCLVCL
ASYCEDHLKPHFQSPAFKKHKLVEPCAELQEKICSQHDKPIEIYCRTDQSFICYLCTMDQ
HQGHDTVAAKAERTKKQNEVKEEQMKSQQRIQEKQEKVQELKQTVGTIKRRSQAAVDESE
KIFTELISSMEKKRSEVKELIRAQEKADLSRAERLLKQLEQEIADLKRRITELEQLSHTH
DHIHFLQSFPSLCVSPGSENSPSFTVNQHLSFDGVRKSLSDLKKRVEEICEEEFNKIRPQ
AAAVQMILLSEPESREDFLQYFCYLTLDPNTAHHQLILSEKNRVVKRSRTDQPYSDQPER
FDTWSQVLCKESVCGRCYWEVEWSSFGSVYISVSYKEIRRKGEGDECLFGYNSQSWSLEY
SSSSVSFRHNNAETELRGPASSRIGVYVDHSAGTLSFYSVSNTMKLLHRVHTTFTQPLYA
GFWLDHDLTVRLCDSK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggctggcatttcagtagatcaggatcagttcatctgtccagtgtgtctggat
ctgctgaaggatccagtaactactccctgtggtcacaattactgtaaggtgtgtattaat
ggctgctgggatcaggagtatctgaagggtgtctacagctgcccacagtgtagagagact
ttcactccaaggcctgttctacgcaggaacaacatgctggctgaaatgttggagaaactg
aagaagactgaactccatgctgcttctcctgctcactgttacgctggacctggagatgtg
gagtgtgattcctgcaccgggagaaaacacaaagctgtcaagtcctgtctggtgtgtctg
gcctcctattgtgaagatcatcttaaacctcactttcagtctcctgcctttaagaagcac
aagttagttgaaccctgtgcagagctccaggagaagatctgctctcagcacgacaaaccg
atcgagatctactgtcgtactgaccaaagcttcatctgttacttgtgtacgatggatcag
caccaaggccatgatacggttgcagctaaagcagaaagaactaaaaaacagaatgaggta
aaggaggagcagatgaaatcccagcagaggatccaggagaagcaggagaaggttcaggag
ctgaaacagactgtgggcactattaagaggcgttcacaggcagcagtagatgagagtgag
aagatctttactgaactgatcagctccatggagaaaaagcgctcggaggtgaaggagttg
atcagagctcaggagaaagctgacctgagtcgagctgaacgactcctgaagcaactggag
caggagattgctgatcttaagaggagaatcactgagctggagcagctttcacacacacac
gatcacatccacttcctccagagtttcccgtctctctgtgtttctcctggatctgagaac
tcgcccagcttcactgtcaatcaacatctctcatttgatggagtgaggaaatctctctca
gatctgaaaaaacgagtcgaggaaatctgtgaggaggaattcaacaaaatccgtccacaa
gctgcagcagttcagatgattttactctcagaaccagagagcagagaagattttctgcaa
tatttctgttatctgactctggatcccaacacggcacaccatcaactcattctatctgag
aagaacagagtggtgaagcgcagcaggacagatcagccatactctgatcaaccggagaga
tttgacacctggtctcaggtgttgtgtaaggagagtgtgtgtggacgctgttactgggag
gtggagtggagcagttttggtagtgtgtacatatcagtctcatataaagagatcaggagg
aaaggagagggtgatgagtgtttgtttggatacaacagtcagtcctggagtctggagtat
tcttcttcctctgtctctttccgccacaacaacgctgagacagagctccgaggtccagcg
tcctccagaataggagtgtatgtggatcacagtgcaggaactctgtccttctacagcgtc
tctaacacgatgaagctcctccacagagtccacaccacattcactcagcctctatacgct
gggttctggctagatcatgacttgactgtgagattatgtgattcgaaatga
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