Ictalurus punctatus (channel catfish): 108262433
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Entry
108262433 CDS
T04658
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108262433
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108262433
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-RING_6
CobU
U-box
Glyco_hydro_88
Motif
Other DBs
NCBI-GeneID:
108262433
NCBI-ProteinID:
XP_053537630
Ensembl:
ENSIPUG00000013486
UniProt:
A0A9F7RBM5
LinkDB
All DBs
Position
7:30650053..30655237
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AA seq
549 aa
AA seq
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MAETNILGLQDQFGCPICLDLLKDPVTILCGHTFCMVCINGCWDQEDQKGVYSCPQCKET
FTPRPVVSKNAVLAEVMEKIMIEHQARRPAHCSTVTEECDICTGKKSKAIKSCLVCLASF
CETHLQPHYESPAFKKHKLVEASSXLQEQICSQHDKLLEVYCCNDQQCICMLCMLHEHKG
HDTVSAAEASAEKKKQLLKTQRKCQQRILDREKEHQELSEAVEFYERSAQKAVQESERIF
TELIRSIERRRCEVTELIRAQEKAAVSRAEEVMKQLEQEIAEMKRRDSELEELSHTDPIH
FLQSFPSLLDIPGSADVHSIELSPFLSLEDVTAFVSQLRDKVEKFCCQEFRMVSNAVKEI
QIIPLPEPKSREEFLQYSCQFTLDPDTVNKHLCLSERNTVVTCSETPQSYSVHPDRFDYY
LQVLCTESVCGRCYWELEWSGHHGVSIAVSYKNISRKGKGTECLFGRNDQSWRLFCYPSC
YSFRHIKKEIKIPVMPSSSRIGVYVDHRAGTLSFYSVSDTMKLLHRVHTTFTQPLYPGFV
VCKGSAIKL
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacgaatattttaggacttcaggatcagttcggctgtccaatctgtctggat
ctactcaaggatccagtgactattctctgtggacacactttctgtatggtgtgtattaat
ggctgctgggatcaggaggatcagaagggagtctatagctgtcctcagtgtaaagaaacc
ttcactccaagacctgttgtgagtaaaaacgctgttctggctgaagtaatggagaaaata
atgatagaacaccaagctagacgtcctgctcactgttccactgtaactgaagagtgtgat
atctgcactgggaaaaaatccaaagccatcaagtcctgtctggtgtgtctggcctctttc
tgtgaaactcacctccagcctcactatgaatctcctgcctttaagaagcacaagctggtg
gaagcctccagctgactccaggagcagatctgctctcagcatgacaaactgctggaggtt
tactgttgcaatgatcagcagtgtatctgcatgttgtgtatgttacatgaacataaagga
catgatacagtatcagctgcagaagcaagcgctgagaaaaagaagcagctgttgaagaca
cagagaaaatgtcagcagagaatcttggatagagagaaggagcatcaggagctatcagaa
gctgtggagttttatgagcgctctgcacaaaaagcagttcaggaaagtgagaggatcttt
acggagctgatcagatccatcgagagaagacgttgtgaggtgacagagctgatcagagct
caggagaaagctgcagtgagccgagctgaagaagtcatgaagcagctggagcaggagatt
gcagagatgaagaggagagactctgagctggaggagctttcacacacggatcccatccat
ttcctccagagtttcccctctcttttggacattcctggatctgcagacgtacactccatc
gagctcagtcctttcctctctcttgaggatgtaacagcgtttgtgtctcaactgagggac
aaagtggaaaagttctgctgtcaggagttcagaatggtatcaaatgcagtaaaagaaatc
cagattattcctcttcctgaacccaaaagcagagaagagttcctacagtattcctgccag
ttcacactggacccggacacggtaaataaacacctctgtctgtctgagaggaacacagtg
gtgacctgcagtgaaacaccacaatcctattctgttcatccagacagatttgactattat
ctccaggtgttgtgtacagagagtgtgtgtggacgctgttactgggagctcgaatggagc
ggacatcatggcgtttctatagcagtgtcgtataaaaacatcagcaggaaaggaaaaggt
actgaatgtttgtttggccgaaacgaccagtcctggagattgttttgctatccctcctgc
tactcgttcagacacattaaaaaagaaattaaaatcccagtaatgcccagctcctctaga
ataggagtgtatgtggatcacagggcaggaactctgtccttctacagcgtctcggacacg
atgaagctcctccacagagttcacaccacgttcactcagcctctttaccccgggtttgtg
gtttgtaaaggatcagctattaaactgtaa
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