Ictalurus punctatus (channel catfish): 108268341
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Entry
108268341 CDS
T04658
Symbol
mrc1b
Name
(RefSeq) macrophage mannose receptor 1b
KO
K06560
mannose receptor, C type
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108268341 (mrc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108268341 (mrc1b)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ipu04054
]
108268341 (mrc1b)
04090 CD molecules [BR:
ipu04090
]
108268341 (mrc1b)
04091 Lectins [BR:
ipu04091
]
108268341 (mrc1b)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Phagocytosis
C-lectin receptors
108268341 (mrc1b)
Pattern recognition receptors [BR:
ipu04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
108268341 (mrc1b)
CD molecules [BR:
ipu04090
]
Proteins
108268341 (mrc1b)
Lectins [BR:
ipu04091
]
C-Type lectins
Group 6: Mannose receptor family
108268341 (mrc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
Chordopox_A33R
UL45
Xlink
Ricin_B_lectin
MHYT
CBM_19
Motif
Other DBs
NCBI-GeneID:
108268341
NCBI-ProteinID:
XP_017328741
Ensembl:
ENSIPUG00000003476
UniProt:
A0A2D0RF28
LinkDB
All DBs
Position
7:6380404..6403720
Genome browser
AA seq
1436 aa
AA seq
DB search
MMKSKRLTITAVIVLLLKISHCFADPDGNFLIYNAHKNRCLTDSLQFLEVCNPLSTKQQF
QWTSEDRIYNVAQKKCLGVGSKKEGNKLQWYICNAKNDLQKWECTNNSQFGLKNESLYLS
LEGESYILTLSRKQEDKNQWTIHGTTDSICSQPYQELYTLKGNGYGRPCHFPFRYKNKWY
SDCTRDDSSMKREWCAIELIYEDKELWGYCPTRQIDDFWRKNPLTGVYYQINKESALTWY
QARKSCLQQGGDLLSITEPHEQTLISGLTEGNGPPLWMGLNSLDASSGWHWINGQPLRYL
TWLSGHPSPQPGHSCGAVSQQYDSKWSTDVCSVRHGYICQRVLYTPTIPPAVHTGSCPRP
WIPYTGHCYYLNRAKKTWSEAKDACRRDGGDLLSILNIEEQSFAISQLGYLKTDELWIGL
NDLKTAMFFEWSDHSSVSFVSWEKNEPSHSADDKEDCVLIRGEEGKWADENCKNKYGFIC
KKDAHSSPSTNDTVLTSPGCKPGWTRYGYYCYFIGTETKTFEEAKQMCVKTESYLVDITS
RVENAFLVSLVGIRPEKHFWIGLSNNKDQHTFEWTNSRKVPYTHFNAGMPGGKQGCVGIT
TGTLAGLWDVLSCTNKEKYICKRMAEDVITTPAPITTPAPNCSNEWFPLMNRDFCTKLFH
VEQGQMKTWSEALDFCRELGGDLLSIHTAFDLQLAGNIYTRGAWIGYSIQDPSVGYVWSD
GSSTSYENWQDDEPNNYNNVENCAEMTFWWWRKTGEWNDLHCEDKREWFCEIRRGVTPNE
VEITTETYNKTDDGWTIFNDNQYYISEYMYVSMEEARWFCKQRHGDLVVINDEKERLFLW
HQKQTHSDYYIGMIVDLDKSFKWMEGSPVVFEAWQKKQPALLNSEEYCVKMTYTQGLWES
INCGEQHNFICKRSGSVEVNSTAAPTEPPRGGCAPDWVKFQKKCYKKELDLKTWTEARSY
CKHLGGNLASVTSGLQQAFLTLMMDGDNPEDLWIGFSNLAKKGFKWTDGSVVSYTGWAKG
QPSRTEYMWMWENEEPTCIAMGSMQRLELGKWVTKSCNDTIGFICSRAIDHFIEPSPTKT
PKNFIKVGNDSYMILQKNLTWYDARRQCELEGAHLASIRDLLSQSYIELQTSKLGQPLWI
GLNSKETNGYFLWIDNWQLNMENWAYSEPKRDHPCVYVDVDGKWKTAYCNQTTYSMCKKS
TDIAPTPPVQYPGVCPDIIETEPKMTWLPYRGHCYAFVTESVSWSKASQLCLTRGASLVS
IEDTNEAKFIENYISFLGNENGRFSIGLFKTYEEHWLWLDRSVVDYTNWEESTEYNDYSH
DCAFISTTTKQWGKQHCLYSHAPFICKTAKVAKPTTTSGISPTEEAAAHRNLSGVAVAVV
IAVLFVLAGLAYIYHRRTSRQVATPSYENPMYYNTESPLSEDKDTKSLVDHMENNE
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaagcaagaggttgacaataactgctgttattgtgcttctgcttaaaatatca
cactgctttgctgatccagatggaaatttcttgatctacaatgcacataagaacagatgc
ctgacagacagcctgcaatttttagaggtgtgtaaccctctcagcacaaagcagcagttt
caatggacttctgaggaccgaatctacaatgttgcccagaagaaatgccttggcgtaggg
agcaaaaaggagggcaataaactgcagtggtacatctgtaatgccaaaaatgacctccaa
aagtgggaatgcacgaacaattcacagtttggtctgaagaatgaatcactgtacttgtcc
cttgagggagaatcttatattctaacactgtccagaaagcaggaagacaaaaaccagtgg
acaatacatggaacaacggacagcatttgctctcaaccatatcaagaattatatacgctt
aaaggaaatggctatggtcgtccgtgccattttccattcaggtacaaaaataaatggtat
tcagactgcacaagagacgattcctctatgaaacgcgagtggtgtgcaattgaactgata
tatgaagataaggagctctggggttattgcccgacacgtcagatagatgatttctggcgc
aagaaccctctcacaggcgtgtactaccagataaacaaagagtctgcacttacttggtat
caagccagaaaaagctgtctgcagcaagggggagacctgttaagtatcactgaaccccat
gagcaaaccctcatatcaggtctgactgagggaaatggcccaccgttgtggatggggtta
aacagtttagatgcctcaagtggatggcactggatcaatggccaacctttacgttattta
acctggctcagtgggcatccatctcctcaaccaggtcatagctgtggggcagtaagtcag
caatatgattccaaatggtccactgatgtttgttctgtgagacatggatatatctgccaa
cgagtcctctacactcccactattccaccagcggtgcacacaggttcttgccccagacca
tggataccttacacaggtcactgctactatcttaatcgcgccaaaaaaacatggtcggag
gcaaaagatgcctgtcggcgtgatggtggagacctgctgagcattctcaatatagaagaa
caaagctttgccatctcacaacttggatacttaaagacggacgagttgtggattggctta
aacgacctcaagactgcgatgtttttcgagtggagtgaccactccagtgtttcatttgtc
tcatgggagaagaatgaaccaagccacagtgctgatgataaagaggactgtgttttaata
agaggagaggagggcaagtgggctgatgaaaactgtaaaaacaagtatggattcatctgt
aagaaagatgcccattcaagtccatccactaatgatacggttctcacaagtcctggctgc
aagcctggttggaccagatatgggtattactgctacttcataggaacagaaactaaaacc
ttcgaagaggccaaacagatgtgtgtgaaaacagaatcttatttggttgacatcacaagc
agagttgaaaatgctttcctggtcagcttggtagggatacgaccagagaagcacttctgg
attgggctctctaataacaaggatcagcacacttttgaatggactaacagcagaaaggtt
ccgtacactcactttaatgctggaatgccaggggggaaacaaggctgtgtcggcattacc
acaggaacacttgctggattatgggacgtgctaagttgtactaataaggaaaaatatatc
tgtaaacggatggctgaggatgtcatcactactccagcccccataactacccctgctccc
aattgcagcaacgaatggtttccacttatgaacagagacttctgtacaaagctatttcac
gtggaacagggacaaatgaagacttggtctgaagcgctcgacttctgccgggaacttggg
ggcgatctgctgagtatccacactgctttcgatttgcaactggctggcaatatctacacc
cgtggagcatggattggttacagtatccaggatccctctgttggttatgtgtggagcgat
ggatcctctacgtcttatgaaaactggcaagatgatgaaccgaacaattacaacaatgtg
gaaaactgtgctgaaatgactttttggtggtggagaaaaacaggagaatggaatgacttg
cactgtgaagacaaaagggaatggttttgtgagattcgaagaggagttacaccaaatgaa
gtggaaattacaactgaaacatataataaaacagacgatggctggactatattcaatgat
aatcagtattatatcagtgaatacatgtatgtctctatggaagaagcaagatggttctgt
aagcaaaggcatggtgatcttgtggtcattaatgatgagaaagaaagactatttctgtgg
catcagaaacaaacacatagtgattattatattggcatgatagttgatctggataagtct
ttcaagtggatggaagggtctccagttgtattcgaggcatggcaaaaaaaacagcctgct
cttctgaacagtgaagagtattgtgtaaagatgacttatactcaagggctttgggagagt
ataaactgtggtgaacaacataattttatctgtaaacgaagtggctctgtcgaagtcaat
tccactgctgcccccactgagcccccaaggggaggctgtgctcctgactgggtgaagttt
cagaaaaagtgttacaaaaaagaactggacctgaaaacatggactgaagccagatcatac
tgtaaacatcttggaggaaatctagcctctgttactagtggactccagcaagccttttta
accttaatgatggatggtgataacccagaagatttatggattggcttcagtaacttggca
aaaaaaggatttaaatggacagatgggagtgtcgtcagttatacaggctgggccaaagga
caaccatcaagaacagaatatatgtggatgtgggaaaatgaggaaccaacttgtattgca
atgggaagcatgcaacgacttgagctgggcaagtgggtaacaaaaagctgtaatgatacc
attggatttatttgcagtcgtgctattgatcattttattgaaccaagcccgacaaagaca
cccaaaaattttatcaaggttggaaatgattcttacatgatcttgcaaaaaaacctgaca
tggtatgacgcaaggcgtcagtgtgagttggagggtgctcatcttgctagtattcgagac
ttgcttagtcagtcttacattgagctgcagacctcaaaacttggacagcccctatggatt
ggccttaacagcaaagagacaaatggatactttttgtggattgataactggcagctgaat
atggagaattgggcctacagtgaaccaaagagggaccacccttgtgtttacgtggatgtg
gatggaaaatggaaaactgcctattgcaatcaaactacctacagcatgtgtaagaaatca
acagacattgctccaactccaccagtgcagtaccctggtgtgtgccctgacataattgaa
acggaaccaaagatgacatggctgccttatagagggcactgctatgcatttgtgactgaa
agcgtatcatggagcaaagcctctcagctctgtttgacaagaggtgccagtcttgtcagc
attgaagacacaaatgaggccaagtttatagagaattacatcagttttcttgggaatgaa
aatggcaggttctcgataggcctttttaagacatatgaagagcactggctgtggctagac
agaagtgtcgtggattacactaattgggaagaatctacagagtataatgactatagccat
gactgtgcatttatctccaccacaactaaacaatggggaaaacaacactgcttatattct
catgcaccgttcatctgcaagacagccaaggttgcaaaaccaaccactacttcaggaatt
agtcctacagaagaggctgcagcacataggaacctttctggtgtggctgtggctgtggta
attgcagtgctgtttgtgttggctggattggcttacatctaccacagaaggaccagcaga
caggttgctacaccttcatatgagaacccaatgtattacaatactgaatcccccttgtca
gaggacaaagataccaaatcattagttgaccacatggaaaataatgaataa
DBGET
integrated database retrieval system
