Ictalurus punctatus (channel catfish): 108269045
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Entry
108269045 CDS
T04658
Symbol
rapgef2b
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108269045 (rapgef2b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108269045 (rapgef2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RasGEF_N
PDZ_6
RA
cNMP_binding
PDZ_2
Motif
Other DBs
NCBI-GeneID:
108269045
NCBI-ProteinID:
XP_017330035
Ensembl:
ENSIPUG00000017181
UniProt:
A0A2D0RJD8
LinkDB
All DBs
Position
8:complement(26122333..26253304)
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AA seq
1603 aa
AA seq
DB search
MASYVDNSFRQAVMLNPAERTQQDLEIVYSYLHGMEALSNLREHQLRMMCETVRYERHEA
NEVLYYPDDIGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVEPYQAGKPPITRGYHTECVKP
QLPADFSRLHLADGIHPQVTHVSSSLSGCSITSDSGSSSLSDIYQATESEPGDMDLSGLP
ETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPEGRTEILCMGNSF
GVSPSREKEFMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTTERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGRKLLEW
FHDSSLRDKVTRVVLLWVNNHFNDFEGDPEMTHFLEEFENNLEREKMFGHLRLLNIACAA
KAKLRVVTLTKPSREAPLAFSLLGGSEKGFRIFIENVEPGSKAAEAGLKRGDQILEVNGQ
NFENVQLSKANEILRNNTHLSITVKTNLLVFKELLARPEHDQEPDHDEELDRKNGAPHIP
KIGDIKKASRYSIPDLAVDVEQVMGLEKASKKAKANTVGGRNKLKKIFDKTLTSILPPKP
YNDVGVGQSQDDSIVGMKQSKQIPPALPVSGNLSSSNPDLLQSHHRILDFNNQPEPVPNN
MSDQVLRVFKADQQSRYIMIGKDTTAKEVVAQAIREFALTAAPEAYSLCEVSVTPEGVIK
QRRLPEQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQELLRESQISLLQLSTVEVATQ
LSMRAFELFCAIEPTEYIDDLFKLRSRSSGLSSLKLFEESINRETFWVATEVLREPNQLK
RMKIIKHFIKIALHCRECKNFNSMFAIISGLNLAPVSRMRGTWEKLPSKYEKLFSDLQDL
FDPSRNMAKYRNVLNSQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKE
IRHVGRMAAVNMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLN
AKKLYEDAQMARKVKQYLSNLTLETNEESLQTLSIQCEPSISTLPKSSGDRKRPDTSPVV
ARAALHPRQQLQKSNQALQVPTVALYPSRKKVPVKDLPPFGMNSPQSLKKILSLSEEATE
RHRKQTEDAVSSTSSPPTSPRSSPKKGLGRASDNLSDSGHSEISSRSSLVSTSSLDMGQD
ERRLRYAHAISDGHTGGHGGHRLERRATADPDQYSLGSYSSVQDWRGMYASTAMPSSPSS
EELSQEQGDRVSLDAADSGRGSWTSCSSGSHDSIQAMQQGRSWEALAEGAGLWAGRGSWA
STSSCSSSSAACWGDESEGDTGTIKRRGGKDVGTDPDTCSITSTGSEESKQQSRRPSPIT
AGTTKSSLPRKDGRYRDPPPTPPGYTALSISEVTEGTTHTTRRPPDYTTALQRSRLVTHS
PKPGTEREGEEDEEEVEEEGECLSPKLRDQRRRGPHTAVPPKP
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctacgtggacaacagctttcggcaggcggtgatgctgaacccggccgagagg
acgcaacaggatttggagattgtgtattcgtatttacacggtatggaggcgctgtccaat
ctaagagaacatcagctaaggatgatgtgtgaaaccgtgcgttatgaaagacatgaagca
aatgaagtgctttactatccggatgacatcggcagctgctggtacatcctgctctctgga
tccgtgttcatcaaagagtccatgttcctgcccagatccagtttcgggaagcgttcagcc
gggagtttacgtcgcggatgcgagtgtatcgttctggagccgtccgaaatgatcgtggtg
gactatatggatgagaatgaggagtattttcagcgccaggcttcgcatcgtcagtcccgg
aggagattccgcaaaatcaaccagaagggtgaaaggcagaccatcatcgacacggtggag
ccgtatcaagcgggcaagccgcccataacccgcgggtaccacacggaatgcgttaaacct
cagctcccagcggacttcagcaggcttcacctggctgacgggatccacccgcaggtgacc
cacgtctcctccagcctctcaggatgtagcatcaccagtgactctgggagcagcagcctg
tccgacatctaccaggccacagagagcgagccaggcgacatggacctgagtggcctgccc
gagaccgccgtcgactccgaagaggatgacgatgaggaagacatcgaacgcgcctccgat
cctctcatgagccgagatatcgtccgtgactgcctagagaaagaccccatggaccgcacg
gatgatgacatcgagcaactgctggagttcatgcaccagctgccggcctttgctaacatg
accatgtcggtgaggagggagctgtgtgcggtcatggtgttcgccgtcgtcgagcgagcc
ggaaccatcgtccttaacgacggcgaggagctggactcgtggtcggtgatcctgaacggt
tcggtcgaagtgacgtaccccgagggccgcaccgagatcctctgcatgggcaacagcttc
ggcgtctctcccagcagggagaaagagttcatgaagggtgtgatgaagaccaaggtggac
gactgtcagtttgtgtgtatagcgcagcaggactactgctgcatcctgaaccaggtggag
aagaacatgcagaaggtggaggaggaaggggaaatcgtcatggttaaagaacatcgcgag
ctggatcgcaccggcaccagaaaaggacacattgtcatcaagggcacgacagagcgtctg
accatgcacctggtggaggagcactcagtggtggaccccacctatattgaggacttcctg
ctcacctatcgcaccttcctgtccagccccatggtggtgggcaggaaactgctggagtgg
ttccatgactccagcctcagggacaaggttacacgggtagtcttgctgtgggtgaacaat
cactttaatgactttgaaggtgaccctgaaatgacgcactttctcgaagagtttgagaac
aatctagagagggagaaaatgttcgggcacttaagactgttaaacatagcttgtgctgcc
aaagccaagctgcgggtggtgactctgactaagccgtcacgcgaggctcctctggccttc
agcctgctcggtggctcagagaaaggcttccgcatcttcattgagaatgtggagccgggc
agcaaagctgcagaggcgggcctcaaacgtggcgatcagatcctggaggtaaatgggcag
aactttgagaatgtacagctgtccaaagcaaatgagatcctgcgcaacaatacacatctg
tcgattactgtgaaaacaaatctcttggtgtttaaggagcttctggctcgacctgagcac
gaccaagaacctgaccacgatgaagagctggacaggaagaacggggcgccgcacattccc
aagatcggggacattaagaaggcgagccgttactccattccagacctggctgtggatgtg
gagcaggtgatgggtctggagaaagcaagcaagaaagccaaggccaacacagtgggtggg
aggaacaagctcaagaagatcttcgacaagactctcaccagcattctaccgccaaagccg
tacaatgatgttggtgtaggccagtcccaggatgacagcattgtgggaatgaagcagtcg
aaacagatccctcctgctcttccggtcagcggaaacttatcgtccagtaaccccgacctg
ctgcagtctcaccatcgcatactcgacttcaacaaccagccagaacccgtccctaacaac
atgtcggaccaggtgctgcgcgtcttcaaagctgatcagcagagtcgttacatcatgatc
ggcaaggacactacagccaaggaggtcgtggctcaggccatccgggaatttgctctgacc
gccgcccctgaagcttattcgctgtgtgaggtgtccgtcacccccgagggtgtaatcaag
cagcgccggcttcctgagcagctctccaaactggcggacagaatccagctcagcggcagg
tactacctgaagagcaacatggagacggagacgttgtgctcagacgaggacgcccaggag
cttttgagggagagccagatcagcctgctgcagctaagcacggtggaagtggccacgcag
ctctccatgcgtgccttcgagctcttctgcgccatcgagcccaccgagtacatcgatgac
ctcttcaagttgcggtcgcgctcgtccggactttccagcctcaaactcttcgaggagtcc
ataaaccgagagaccttctgggtggccactgaggtgctgagggaacccaaccagctgaag
cgcatgaagatcatcaagcatttcatcaagatcgccctgcactgccgcgaatgcaagaac
ttcaactccatgttcgcgatcatcagtggtctaaacctggcgcccgtgtccagaatgcga
gggacttgggagaaacttcccagcaagtacgagaaactcttcagtgacctgcaggatctg
ttcgacccgtccagaaacatggccaagtaccgaaacgttctcaacagccagaatctgcag
ccgccaatcatccctcttttccccgtcatcaaaaaagacctcaccttcctccatgaaggc
aacgattcaaaggtggacggcttggtgaactttgagaagctgcgtatgatcgctaaagag
atcagacacgtgggtcggatggcagccgtgaacatggacccggcgctgatgttccgcacc
aggaagaagaagtggaggagtttgggttccctgagccagggcagtgccaatgctgctgtc
ctggacgtgactcagacgggtgggcataagaagcgtgtaaggcggagttccttcctcaat
gccaagaagctgtacgaggacgcacaaatggcacgcaaggtcaagcagtacctgtctaac
ctcacactggagaccaacgaggagagcctgcagacgctgtctatacagtgtgaaccctcc
ataagtacactgcctaagagctcaggggacaggaagaggccggacacctcgcccgtggta
gcgcgagctgcgctgcacccacgccagcagctccagaaatccaaccaggccctgcaggtg
cccactgtcgccctctacccatcccgcaagaaggtgccggtcaaagacctgccaccgttt
ggcatgaattctccacagtccctgaagaagattctgtctctgtctgaggaggcgactgag
agacacaggaagcagacggaagatgctgtgtctagcacttcgtctcctcctacgtctcct
cgtagctccccaaagaaaggtttaggaagagcgagtgataacctgtcagactcaggccac
agtgagatctcttctcgctccagcctggtcagtacgtcctctctggacatgggccaggac
gagcggcgtctccgatatgcgcacgcgatcagcgacggtcacaccggtgggcacggaggt
caccggctcgagcgtagggctacagctgacccggaccagtacagtcttggctcgtactcg
tcggtgcaagactggcgcggcatgtacgctagcacggccatgccttcgtcgccgagctcg
gaggagttaagtcaggagcagggcgaccgcgtctccttggacgctgcagactcgggacga
ggcagctggacgtcctgctctagcggctcgcacgacagcatccaggccatgcagcaaggc
cggagctgggaggcgctggccgagggggcggggctgtgggccggacgaggcagctgggcg
tcgacctcgtcgtgctcgtcctcgtcggcagcgtgctggggagacgagtccgagggagac
acgggaactatcaagcggagaggaggtaaagacgtcggcaccgaccctgacacctgcagc
atcacttcgacaggatcagaggagtctaaacagcagagccgccggccgtctcccatcacc
gccggcacgaccaagagcagcctgccacgcaaagacggccgataccgtgatccccctccc
actcctccaggctacacggctctgtccatctcggaggtgacggaggggacgacgcacacg
accaggaggcctccggactacaccacggcgctgcagcgctcccgcctcgttacgcactcg
cctaaaccggggaccgagcgtgagggagaggaagacgaggaggaggtagaggaggagggt
gagtgcttatctcccaaactcagagatcagaggaggagaggtccacacacagcagtgccc
cccaagccatga
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integrated database retrieval system
