Ictalurus punctatus (channel catfish): 108269064
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Entry
108269064 CDS
T04658
Name
(RefSeq) homeobox protein CDX-4
KO
K09312
homeobox protein CDX1/4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108269064
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
108269064
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Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108269064
NCBI-ProteinID:
XP_047013082
UniProt:
A0A979EYY9
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Position
8:8113645..8116607
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AA seq
273 aa
AA seq
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MYVGYLLDKGEGNMYHHQGPVRRSGINLPPQNFVSTPQYSDFGGYHHMTSMDTHSQATGP
WAAPYGGPREDWGAYSLPPPNTIATPMSNSSPGQVSYCSPDYNSMHNPGSAVLPPPPDNI
SVAQMSPDKERRNSYQWMSKTVQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHFNRYITI
RRKSELAVNLGLSERQVKIWFQNRRAKERKLIKKKLGQSDGSSGSVHSDPGSVSPLPVPG
SLSPSDVHGSVYPPPGLNVLPSIRNIQQVTVTQ
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtatgttggataccttttggataaaggcgaaggaaacatgtatcaccaccaaggacct
gtacggcgatctggaatcaaccttccgccacagaatttcgtctccacaccacagtactct
gattttggtggataccatcatatgaccagcatggacacacactctcaggccacaggaccg
tgggccgctccgtacggcggtccgagggaggactggggcgcctacagccttccgcctccc
aacaccatagcaactccaatgagcaactcatcaccgggacaagtctcctattgctcgcct
gattacaattctatgcataacccggggtcagctgtgttgcccccgccgcccgacaacatt
tccgtggcccaaatgtccccggataaagaacggcgcaactcttatcagtggatgagcaaa
accgtccagtcctcttccaccggaaaaacgagaacaaaggagaaatatcgagtggtctac
acggatcaccaacgactggagctggagaaggagtttcactttaatcgttacattaccatt
agaaggaaatcagagctggcggtgaatctgggtctctcagagagacaggtcaaaatttgg
tttcaaaaccgccgcgccaaggagaggaagctgatcaagaagaagctgggtcagtcagac
ggcagcagcggctccgtgcacagtgaccccggctcggtgagtccgctgcccgttcccggt
tcgctcagtccctcggatgtgcacggctccgtttacccgcctccaggattgaacgtctta
ccgtccataagaaacattcagcaagttacagtcacgcagtaa
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