Ictalurus punctatus (channel catfish): 108269222
Help
Entry
108269222 CDS
T04658
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 2 isoform X1
KO
K08618
a disintegrin and metalloproteinase with thrombospondin motifs 2 [EC:
3.4.24.14
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ipu01002
]
108269222
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.14 procollagen N-endopeptidase
108269222
Peptidases and inhibitors [BR:
ipu01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
108269222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
Pep_M12B_propep
Reprolysin
ADAMTS_CR_2
ADAMTS_spacer1
Reprolysin_5
TSP1_spondin
Reprolysin_2
Reprolysin_3
Reprolysin_4
ADAMTS_CR_3
TSP1_CCN
Peptidase_M10
PLAC
DUF4953
Motif
Other DBs
NCBI-GeneID:
108269222
NCBI-ProteinID:
XP_017330433
Ensembl:
ENSIPUG00000017438
UniProt:
A0A2D0RIT6
LinkDB
All DBs
Position
8:complement(26395557..26532961)
Genome browser
AA seq
1379 aa
AA seq
DB search
MNPAAAFPILISALLLPAHGLYIASSLDSLQHVLGDYGLVRPVLSDAHGRFLSHAVSAGA
ARGQFRRRWRREAETVDQPRGDGERLYYNVTVFGREFHLRLRPNTRLVAPGAKMEWQTPD
GTRSEALNTDCMYVGDITDVQGASVAISNCDGLAGMIRTEKEEFFIEPVETGHHVMEQED
GGGGRPHIVYRSAAVKKPPTSPLAADLHSRGADLGGLLDLETLYEGVERSANQSRRTRRQ
SPERAYNIEVLLGVDDSVVQFHGSQHVEKYLLTLMNIVNEIYHDRSLGARINVVLVRIVL
VDAKKSTNLIELGNPSQSLENVCRWAFEQQRKDTNDKDYHDHAIFLTRQEFGPTGMQGYA
PVTGMCHPVRSCTLNHEDGFSSAFVVAHETGHVLGMEHDGQGNRCGDEVQMGSIMAPLVQ
AAFHRFRWSHCSQQELGRYLHSYDCLRDDPFEHTWEELPQLPGLHYSMNEQCRFDFGAGY
MMCTAYRPFDPCKQLWCSHPDNPFFCKTKKGPPIDGTICGDGKHCFKGRCDWLSPAFIKR
DGNWGMWSEYGACNRPCGRGLQFRTRDCDDPRPANGGRTCPGSNYQFRVCNTHECEDPYR
DYRAEQCSSMDSKFEHHAMKHHWLPYEHPDPKQRCTLYCQSKETRVVVNMQEPVEPGSRC
SYKDPYSVCVYGECEKVGCENVVGSPLLEDKCGVCGGDGTKCKTHRFNFTFSDKKGVIKV
LEIPKGARHLLIQELNGTANILAVKNKATGDFFLNSHGDYPETRSVIEKGLEWQYENKNY
KDTIQTNGPLKNEVVIMIRMHSSARAKVSIKYITDFDRLSDRANENNMVPDNAVPYSWVV
KKWTPCSKTCGTGTQMTRYGCRKNAEMRLVHRRFCEKIKKPSVIFRDCYLRECAQPIWVT
GDWGECSKSCGRFGTQTRSVRCVQPLKDGKFKSIRSRYCNDERPEARRDCNRMLCPAEWK
LGPWSQCSVTCGKGTQERQVLCHTRDNTIGLCLESKPLALRSCSMDPCPKGMSDFNKHGN
FLIQWLSRHDAKYPVQRFSSSQCRTDRSMLCKMAMLQQYCKIPAFQRICCKACSAANTTS
IAPPMGHPLTTPRLSTRNHGFTMTTTRPASATLTLTRATTESISYTEYNTWEHTILTTGT
KVEATTPNVPINTPSNFLTEPNTPTPFAMTTQTSSPKVTLSIIDDAIQNTAVNTDTEKSS
VTGLIEVDVTLVTSPTAEFDESQVGSGAHPGTTVQTSGDDELSTSGWRETETVTNTSMTL
ILTTLMPTFEEKSTREESIEPSSIMTTSSITKPTTVTMTTPVPTVEKLTTTRPAIKEEEN
NAIEVPSQISGVDSEFPENNIIPRRGRVFLRERTRNKRIQELLEEKRNFLRRMKRAQGF
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgccgccgcgtttccgatcttgatctccgcgctgctgctgcccgcccacggc
ctctacatcgccagtagcctagattccctgcagcacgtgctgggggactatggactggtg
aggcccgtgttgagcgatgcgcacggccgcttcttgtcgcacgcggtatcggcaggcgca
gcacgcgggcagttccgtaggcgctggcgaagagaggcggaaacggtcgaccagccgcga
ggagacggtgagaggctctactacaacgtcaccgtcttcggccgggagttccatctgcgc
ctgcgccccaacacgcgcctggtggctcccggagccaagatggagtggcagacgccggac
ggcacgcgctcggaggcgctaaacaccgactgcatgtacgtgggcgacatcacggacgta
caaggagcctcggtggccatcagtaactgcgacggcctggcggggatgatccgaaccgag
aaggaggagttctttatcgagccggtggagacgggacatcatgtgatggagcaggaggat
ggtggcggcggtcgtcctcacatcgtgtaccgctctgctgccgtgaagaagcctccaacc
agcccgctagccgcagaccttcattccagaggtgctgatcttggaggtctactggatctg
gagactctgtatgaaggagtagagcggagtgcgaaccagagccggagaactcgccgtcag
tctcccgagcgagcatacaacattgaggtgctgcttggggttgacgattcggtggtgcag
ttccatggatcgcaacacgtcgagaagtacctgcttacgctcatgaacatcgtgaatgaa
atctaccatgaccgttctctgggagcgcggatcaacgtggttctggtacggattgtcttg
gtggatgccaaaaagtccacgaatctgatcgagctgggaaacccgtctcagagtctggag
aacgtgtgccgctgggcgtttgagcagcagaggaaagacactaatgataaagactaccat
gaccacgccattttccttacacgccaagagttcggaccaacagggatgcagggttacgcg
ccggtgactggtatgtgccacccagtcagaagctgcactctgaaccacgaggacggcttc
tcctccgccttcgtagtggcccacgagaccggtcatgtgttgggaatggagcatgatggt
caagggaatcgatgtggggatgaggtgcagatgggcagcatcatggctcccctggtgcag
gccgccttccacaggttccgctggtcccactgtagccaacaggaactgggccgctattta
cactcatatgactgcctgagagacgatccatttgagcacacatgggaggagttgccccag
ctgccaggcctgcactactccatgaatgaacagtgtcgctttgacttcggcgccggatac
atgatgtgcacagcgtaccggccctttgacccatgtaagcagctctggtgttctcatccc
gacaatccctttttctgcaagaccaaaaaaggacctccgattgatggcacgatatgtggg
gacggcaagcactgctttaaaggacgctgtgactggctgagtccagccttcataaagcga
gatgggaactggggcatgtggagtgagtacggtgcctgcaatcggccctgcggcagagga
ctacaattccgcactcgtgattgtgacgacccacgtcctgccaatggcggacgcacctgc
ccaggatcaaactatcagttccgggtgtgtaacactcatgagtgtgaggacccgtaccgg
gactacagggccgagcagtgcagctccatggacagcaaatttgagcatcacgcaatgaaa
caccactggctgccttatgagcaccctgaccctaaacagcgctgcacattgtactgccag
tccaaagagacacgagtggtggtgaatatgcaggagccggtggaaccaggcagtcgctgc
tcctacaaagacccctacagtgtgtgtgtgtatggcgagtgcgagaaagtgggctgtgag
aacgtggtgggttcaccgcttctggaagacaagtgcggtgtgtgtgggggggatggaacc
aaatgcaagactcacaggttcaacttcaccttcagtgataagaaaggtgtcatcaaagtg
cttgaaattcctaaaggagcgaggcatctgcttatccaggaactcaacggaacagctaat
attttggctgtgaagaacaaagcaacgggggatttcttcctaaactctcatggagattac
ccagaaacccgttcggtcatcgagaaagggctcgagtggcagtatgagaacaagaattac
aaagacaccattcagaccaacggacctctgaagaatgaggtcgttatcatgattcggatg
cacagctcagcacgggcgaaggtgtcgatcaaatacattaccgactttgaccgactgagc
gacagagccaacgagaacaacatggtgcctgacaatgcagtaccctactcctgggtggtt
aagaagtggaccccgtgctccaaaacctgtgggacaggcacgcagatgacacgctacggt
tgccgaaagaacgctgagatgaggctggtgcaccggcgcttctgtgagaaaatcaaaaag
ccttctgtaattttcagggactgctacttacgagaatgcgctcagcccatctgggtgact
ggagattggggtgagtgcagtaagtcctgtggtaggtttgggactcagacacgctcagtg
cgctgcgtccagccgctcaaagacggaaagttcaaatcgatccggagtcgatactgcaac
gatgaacgtcctgaagcgagacgcgactgcaaccgcatgctctgtcctgctgagtggaaa
ctggggccgtggtcacagtgttcggtgacgtgtggcaaagggactcaagagaggcaggtg
ctttgtcatactcgtgacaacaccatcggtctgtgtttggaatccaaacctctggcactg
agatcctgcagcatggacccatgcccgaagggcatgtcggactttaacaagcatggcaac
ttcctgattcagtggctgtcacgccatgacgctaaatacccggtgcagaggttctcaagc
tcacagtgccgcactgaccgctccatgttgtgcaagatggcgatgctccagcagtattgc
aagatacctgctttccagcgcatctgctgcaaagcctgcagcgctgccaacacgacaagc
attgctccaccgatgggtcatccactaacgacaccaagattaagcaccagaaaccacggt
ttcactatgacaaccacaagacctgcatctgcgacattgacactgacaagagccactacg
gagagcatttcatatacagaatataacacctgggaacatacaatccttacaacaggtacc
aaggtagaggctacaactccaaacgttcccataaacacaccaagcaacttcttgacagag
ccaaacacacctacgccattcgccatgacaacccagacttcaagtcctaaagttaccttg
tccattatagatgatgcgatacaaaacacagcagtcaacactgatacagaaaagagtagt
gttactggactgattgaggtagatgtcactttggtgaccagccccactgctgagtttgat
gaatcccaagttggcagtggtgcccaccctggaacgacggtccaaaccagtggggatgat
gagttaagcacttcaggctggcgtgagacagaaacagtcaccaataccagtatgacgctt
atattgacaacactaatgccaacttttgaagagaagtcaacacgtgaagaaagtattgaa
ccatcatccatcatgacaacgtcatccattacaaagccaaccacagtgacaatgaccaca
ccagtaccaacagtagagaagctgacaacaaccaggccagccatcaaagaggaggaaaac
aacgcaattgaggtgccttcccaaattagtggcgtggacagcgagttccccgagaacaac
atcattccaagaagagggcgcgtcttcctgcgggaacgaacacgcaacaagcggatccag
gagcttcttgaggaaaaaaggaactttttacgccgaatgaaacgagctcagggcttttaa
DBGET
integrated database retrieval system
